Protein–RNA interactions for Protein: P50405

Sftpb, Pulmonary surfactant-associated protein B, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SftpbP50405 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC18.77■□□□□ 0.6
SftpbP50405 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SftpbP50405 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
SftpbP50405 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
SftpbP50405 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC18.77■□□□□ 0.6
SftpbP50405 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
SftpbP50405 Gm14281-201ENSMUST00000121700 1294 ntBASIC18.77■□□□□ 0.6
SftpbP50405 Gm43060-201ENSMUST00000200621 289 ntBASIC18.77■□□□□ 0.6
SftpbP50405 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
SftpbP50405 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
SftpbP50405 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SftpbP50405 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC18.77■□□□□ 0.6
SftpbP50405 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC18.77■□□□□ 0.59
SftpbP50405 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
SftpbP50405 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
SftpbP50405 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SftpbP50405 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SftpbP50405 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SftpbP50405 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SftpbP50405 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SftpbP50405 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SftpbP50405 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
SftpbP50405 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC18.76■□□□□ 0.59
SftpbP50405 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC18.76■□□□□ 0.59
SftpbP50405 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC18.76■□□□□ 0.59
SftpbP50405 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SftpbP50405 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
SftpbP50405 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SftpbP50405 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SftpbP50405 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SftpbP50405 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SftpbP50405 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
SftpbP50405 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
SftpbP50405 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SftpbP50405 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SftpbP50405 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
SftpbP50405 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
SftpbP50405 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
SftpbP50405 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SftpbP50405 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
SftpbP50405 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SftpbP50405 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC18.74■□□□□ 0.59
SftpbP50405 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SftpbP50405 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
SftpbP50405 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SftpbP50405 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SftpbP50405 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
SftpbP50405 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SftpbP50405 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC18.74■□□□□ 0.59
SftpbP50405 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
SftpbP50405 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
SftpbP50405 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SftpbP50405 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SftpbP50405 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
SftpbP50405 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
SftpbP50405 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SftpbP50405 Gm45906-201ENSMUST00000208911 1430 ntBASIC18.74■□□□□ 0.59
SftpbP50405 Fst-202ENSMUST00000223640 2612 ntBASIC18.73■□□□□ 0.59
SftpbP50405 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
SftpbP50405 Gm45606-201ENSMUST00000209836 2795 ntBASIC18.73■□□□□ 0.59
SftpbP50405 Gm10167-201ENSMUST00000150411 1479 ntBASIC18.73■□□□□ 0.59
SftpbP50405 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SftpbP50405 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
SftpbP50405 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SftpbP50405 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
SftpbP50405 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SftpbP50405 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SftpbP50405 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC18.73■□□□□ 0.59
SftpbP50405 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
SftpbP50405 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SftpbP50405 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
SftpbP50405 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SftpbP50405 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SftpbP50405 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SftpbP50405 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
SftpbP50405 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SftpbP50405 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SftpbP50405 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
SftpbP50405 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SftpbP50405 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SftpbP50405 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC18.72■□□□□ 0.59
SftpbP50405 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC18.72■□□□□ 0.59
SftpbP50405 Gm26971-201ENSMUST00000182423 1072 ntBASIC18.72■□□□□ 0.59
SftpbP50405 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC18.72■□□□□ 0.59
SftpbP50405 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
SftpbP50405 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SftpbP50405 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
SftpbP50405 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SftpbP50405 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC18.72■□□□□ 0.59
SftpbP50405 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
SftpbP50405 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SftpbP50405 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
SftpbP50405 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
SftpbP50405 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SftpbP50405 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
SftpbP50405 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SftpbP50405 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SftpbP50405 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
SftpbP50405 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SftpbP50405 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC18.71■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms