Protein–RNA interactions for Protein: P49962

Srp9, Signal recognition particle 9 kDa protein, mousemouse

Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp9P49962 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Srp9P49962 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Srp9P49962 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Srp9P49962 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC15.57■□□□□ 0.08
Srp9P49962 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Srp9P49962 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Srp9P49962 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Srp9P49962 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Srp9P49962 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Srp9P49962 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Srp9P49962 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Srp9P49962 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Srp9P49962 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Srp9P49962 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Srp9P49962 Gm27801-201ENSMUST00000184174 223 ntBASIC15.56■□□□□ 0.08
Srp9P49962 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Srp9P49962 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Srp9P49962 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Srp9P49962 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Srp9P49962 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Srp9P49962 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Srp9P49962 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Srp9P49962 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Srp9P49962 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Srp9P49962 Gm42922-201ENSMUST00000195887 2078 ntBASIC15.56■□□□□ 0.08
Srp9P49962 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Srp9P49962 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Srp9P49962 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Srp9P49962 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Srp9P49962 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Srp9P49962 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Srp9P49962 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Srp9P49962 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC15.55■□□□□ 0.08
Srp9P49962 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Srp9P49962 Gm40848-201ENSMUST00000221998 324 ntBASIC15.55■□□□□ 0.08
Srp9P49962 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC15.55■□□□□ 0.08
Srp9P49962 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Srp9P49962 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Srp9P49962 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Srp9P49962 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Srp9P49962 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Srp9P49962 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Srp9P49962 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Srp9P49962 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC15.55■□□□□ 0.08
Srp9P49962 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Srp9P49962 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Srp9P49962 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Srp9P49962 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Srp9P49962 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Srp9P49962 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Srp9P49962 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
Srp9P49962 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC15.54■□□□□ 0.08
Srp9P49962 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Srp9P49962 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Srp9P49962 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Srp9P49962 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Srp9P49962 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Srp9P49962 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Srp9P49962 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Srp9P49962 AC123834.2-201ENSMUST00000224038 2340 ntBASIC15.54■□□□□ 0.08
Srp9P49962 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Srp9P49962 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Srp9P49962 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
Srp9P49962 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Srp9P49962 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Srp9P49962 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Srp9P49962 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Srp9P49962 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Srp9P49962 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC15.53■□□□□ 0.08
Srp9P49962 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Srp9P49962 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Srp9P49962 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
Srp9P49962 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Srp9P49962 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Srp9P49962 Gm32699-201ENSMUST00000221728 1988 ntBASIC15.53■□□□□ 0.08
Srp9P49962 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Srp9P49962 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Srp9P49962 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Srp9P49962 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Srp9P49962 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Srp9P49962 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Srp9P49962 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Srp9P49962 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC15.52■□□□□ 0.08
Srp9P49962 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
Srp9P49962 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC15.52■□□□□ 0.08
Srp9P49962 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Srp9P49962 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC15.52■□□□□ 0.08
Srp9P49962 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Srp9P49962 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Srp9P49962 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC15.52■□□□□ 0.07
Srp9P49962 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Srp9P49962 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Srp9P49962 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Srp9P49962 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Srp9P49962 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Srp9P49962 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Srp9P49962 Gm15853-202ENSMUST00000195518 2041 ntBASIC15.51■□□□□ 0.07
Srp9P49962 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Srp9P49962 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Srp9P49962 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms