Protein–RNA interactions for Protein: P48985

Atoh1, Protein atonal homolog 1, mousemouse

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atoh1P48985 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Atoh1P48985 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Atoh1P48985 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Atoh1P48985 Gm45058-201ENSMUST00000205810 766 ntBASIC20.83■□□□□ 0.93
Atoh1P48985 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Atoh1P48985 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Atoh1P48985 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Atoh1P48985 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
Atoh1P48985 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
Atoh1P48985 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Atoh1P48985 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC20.83■□□□□ 0.92
Atoh1P48985 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Atoh1P48985 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC20.83■□□□□ 0.92
Atoh1P48985 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Atoh1P48985 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Atoh1P48985 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Atoh1P48985 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Atoh1P48985 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC20.82■□□□□ 0.92
Atoh1P48985 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Atoh1P48985 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
Atoh1P48985 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC20.82■□□□□ 0.92
Atoh1P48985 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Atoh1P48985 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC20.82■□□□□ 0.92
Atoh1P48985 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Atoh1P48985 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC20.82■□□□□ 0.92
Atoh1P48985 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Atoh1P48985 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Atoh1P48985 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Atoh1P48985 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Atoh1P48985 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Atoh1P48985 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Atoh1P48985 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Atoh1P48985 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Atoh1P48985 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Atoh1P48985 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Atoh1P48985 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Atoh1P48985 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Atoh1P48985 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Atoh1P48985 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Atoh1P48985 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Atoh1P48985 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC20.8■□□□□ 0.92
Atoh1P48985 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
Atoh1P48985 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Atoh1P48985 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Atoh1P48985 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Atoh1P48985 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC20.8■□□□□ 0.92
Atoh1P48985 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Atoh1P48985 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Atoh1P48985 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
Atoh1P48985 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Atoh1P48985 Gm27463-201ENSMUST00000183569 57 ntBASIC20.79■□□□□ 0.92
Atoh1P48985 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Atoh1P48985 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Atoh1P48985 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC20.79■□□□□ 0.92
Atoh1P48985 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Atoh1P48985 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Atoh1P48985 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Atoh1P48985 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Atoh1P48985 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Atoh1P48985 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Atoh1P48985 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Atoh1P48985 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Atoh1P48985 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Atoh1P48985 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC20.78■□□□□ 0.92
Atoh1P48985 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Atoh1P48985 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Atoh1P48985 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Atoh1P48985 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Atoh1P48985 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC20.78■□□□□ 0.92
Atoh1P48985 Gm12085-201ENSMUST00000119263 940 ntBASIC20.78■□□□□ 0.92
Atoh1P48985 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Atoh1P48985 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC20.78■□□□□ 0.92
Atoh1P48985 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
Atoh1P48985 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
Atoh1P48985 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Atoh1P48985 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC20.78■□□□□ 0.92
Atoh1P48985 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Atoh1P48985 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Atoh1P48985 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Atoh1P48985 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Atoh1P48985 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Atoh1P48985 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Atoh1P48985 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC20.77■□□□□ 0.92
Atoh1P48985 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Atoh1P48985 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Atoh1P48985 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Atoh1P48985 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Atoh1P48985 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Atoh1P48985 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Atoh1P48985 Gm10654-201ENSMUST00000098653 1633 ntBASIC20.76■□□□□ 0.91
Atoh1P48985 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Atoh1P48985 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Atoh1P48985 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Atoh1P48985 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Atoh1P48985 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Atoh1P48985 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Atoh1P48985 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Atoh1P48985 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC20.76■□□□□ 0.91
Atoh1P48985 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Atoh1P48985 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms