Protein–RNA interactions for Protein: P47708

Rph3a, Rabphilin-3A, mousemouse

Predictions only

Length 681 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rph3aP47708 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC17.62■□□□□ 0.41
Rph3aP47708 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
Rph3aP47708 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rph3aP47708 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Rph3aP47708 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rph3aP47708 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC17.61■□□□□ 0.41
Rph3aP47708 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Rph3aP47708 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC17.61■□□□□ 0.41
Rph3aP47708 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rph3aP47708 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC17.61■□□□□ 0.41
Rph3aP47708 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rph3aP47708 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC17.61■□□□□ 0.41
Rph3aP47708 AC160393.1-201ENSMUST00000218378 1279 ntBASIC17.61■□□□□ 0.41
Rph3aP47708 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Rph3aP47708 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC17.61■□□□□ 0.41
Rph3aP47708 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rph3aP47708 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rph3aP47708 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Rph3aP47708 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rph3aP47708 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rph3aP47708 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rph3aP47708 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rph3aP47708 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rph3aP47708 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rph3aP47708 Gm7290-201ENSMUST00000104990 617 ntBASIC17.6■□□□□ 0.41
Rph3aP47708 Gm12918-201ENSMUST00000120234 636 ntBASIC17.6■□□□□ 0.41
Rph3aP47708 Gm15710-201ENSMUST00000121821 636 ntBASIC17.6■□□□□ 0.41
Rph3aP47708 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC17.6■□□□□ 0.41
Rph3aP47708 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Rph3aP47708 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC17.6■□□□□ 0.41
Rph3aP47708 Gm5075-201ENSMUST00000196916 622 ntBASIC17.6■□□□□ 0.41
Rph3aP47708 Gm42555-201ENSMUST00000199304 1039 ntBASIC17.6■□□□□ 0.41
Rph3aP47708 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC17.6■□□□□ 0.41
Rph3aP47708 Gm6365-201ENSMUST00000054711 744 ntBASIC17.6■□□□□ 0.41
Rph3aP47708 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC17.6■□□□□ 0.41
Rph3aP47708 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC17.6■□□□□ 0.41
Rph3aP47708 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rph3aP47708 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rph3aP47708 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Rph3aP47708 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rph3aP47708 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC17.6■□□□□ 0.41
Rph3aP47708 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Rph3aP47708 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rph3aP47708 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Rph3aP47708 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rph3aP47708 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Rph3aP47708 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rph3aP47708 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rph3aP47708 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rph3aP47708 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rph3aP47708 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC17.59■□□□□ 0.41
Rph3aP47708 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rph3aP47708 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rph3aP47708 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rph3aP47708 Gm37179-201ENSMUST00000194862 823 ntBASIC17.59■□□□□ 0.41
Rph3aP47708 AC164629.5-201ENSMUST00000220387 632 ntBASIC17.59■□□□□ 0.41
Rph3aP47708 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rph3aP47708 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Rph3aP47708 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Rph3aP47708 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rph3aP47708 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rph3aP47708 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC17.59■□□□□ 0.41
Rph3aP47708 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rph3aP47708 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Rph3aP47708 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Rph3aP47708 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
Rph3aP47708 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC17.58■□□□□ 0.41
Rph3aP47708 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Rph3aP47708 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Rph3aP47708 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rph3aP47708 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rph3aP47708 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rph3aP47708 Fam105a-203ENSMUST00000226170 3043 ntBASIC17.58■□□□□ 0.4
Rph3aP47708 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rph3aP47708 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rph3aP47708 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Rph3aP47708 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rph3aP47708 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rph3aP47708 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rph3aP47708 Gm8309-201ENSMUST00000206627 1448 ntBASIC17.57■□□□□ 0.4
Rph3aP47708 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rph3aP47708 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rph3aP47708 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rph3aP47708 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Rph3aP47708 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC17.57■□□□□ 0.4
Rph3aP47708 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC17.57■□□□□ 0.4
Rph3aP47708 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rph3aP47708 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rph3aP47708 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Rph3aP47708 Dmtn-210ENSMUST00000228824 2377 ntBASIC17.57■□□□□ 0.4
Rph3aP47708 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rph3aP47708 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rph3aP47708 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rph3aP47708 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rph3aP47708 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Rph3aP47708 Slc35b2-207ENSMUST00000226086 850 ntBASIC17.56■□□□□ 0.4
Rph3aP47708 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rph3aP47708 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Rph3aP47708 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rph3aP47708 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms