Protein–RNA interactions for Protein: P43275

Hist1h1a, Histone H1.1, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h1aP43275 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Hist1h1aP43275 Wdr70-203ENSMUST00000227371 1130 ntBASIC15.12■□□□□ 0.01
Hist1h1aP43275 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Hist1h1aP43275 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC15.12■□□□□ 0.01
Hist1h1aP43275 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Hist1h1aP43275 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Hist1h1aP43275 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Hist1h1aP43275 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
Hist1h1aP43275 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Hist1h1aP43275 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Hist1h1aP43275 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
Hist1h1aP43275 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Hist1h1aP43275 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Hist1h1aP43275 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
Hist1h1aP43275 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Hist1h1aP43275 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC15.11■□□□□ 0.01
Hist1h1aP43275 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Hist1h1aP43275 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Hist1h1aP43275 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Hist1h1aP43275 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Hist1h1aP43275 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Hist1h1aP43275 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Hist1h1aP43275 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Hist1h1aP43275 Gm43702-201ENSMUST00000198772 2546 ntBASIC15.11■□□□□ 0.01
Hist1h1aP43275 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Hist1h1aP43275 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Hist1h1aP43275 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Hist1h1aP43275 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Hist1h1aP43275 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Hist1h1aP43275 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Hist1h1aP43275 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Hist1h1aP43275 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Hist1h1aP43275 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Hist1h1aP43275 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Hist1h1aP43275 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Hist1h1aP43275 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Hist1h1aP43275 Gm7860-201ENSMUST00000121190 879 ntBASIC15.1■□□□□ 0.01
Hist1h1aP43275 Gm27801-201ENSMUST00000184174 223 ntBASIC15.1■□□□□ 0.01
Hist1h1aP43275 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC15.1■□□□□ 0.01
Hist1h1aP43275 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC15.1■□□□□ 0.01
Hist1h1aP43275 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC15.1■□□□□ 0.01
Hist1h1aP43275 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC15.1■□□□□ 0.01
Hist1h1aP43275 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Hist1h1aP43275 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Hist1h1aP43275 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hist1h1aP43275 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hist1h1aP43275 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hist1h1aP43275 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Hist1h1aP43275 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Hist1h1aP43275 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hist1h1aP43275 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hist1h1aP43275 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hist1h1aP43275 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hist1h1aP43275 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hist1h1aP43275 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Hist1h1aP43275 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hist1h1aP43275 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hist1h1aP43275 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Hist1h1aP43275 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Hist1h1aP43275 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hist1h1aP43275 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hist1h1aP43275 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hist1h1aP43275 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC15.09■□□□□ 0.01
Hist1h1aP43275 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Hist1h1aP43275 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hist1h1aP43275 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Hist1h1aP43275 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Hist1h1aP43275 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC15.08■□□□□ 0
Hist1h1aP43275 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Hist1h1aP43275 Gm12821-201ENSMUST00000120022 600 ntBASIC15.08■□□□□ 0
Hist1h1aP43275 Gm43173-201ENSMUST00000202246 593 ntBASIC15.08■□□□□ 0
Hist1h1aP43275 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Hist1h1aP43275 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Hist1h1aP43275 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC15.08■□□□□ 0
Hist1h1aP43275 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC15.08■□□□□ 0
Hist1h1aP43275 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Hist1h1aP43275 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC15.08■□□□□ 0
Hist1h1aP43275 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC15.08■□□□□ 0
Hist1h1aP43275 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Hist1h1aP43275 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Hist1h1aP43275 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Hist1h1aP43275 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Hist1h1aP43275 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC15.07■□□□□ 0
Hist1h1aP43275 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Hist1h1aP43275 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Hist1h1aP43275 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Hist1h1aP43275 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Hist1h1aP43275 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Hist1h1aP43275 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC15.07■□□□□ 0
Hist1h1aP43275 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Hist1h1aP43275 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Hist1h1aP43275 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Hist1h1aP43275 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC15.07■□□□□ 0
Hist1h1aP43275 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Hist1h1aP43275 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Hist1h1aP43275 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Hist1h1aP43275 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC15.07■□□□□ 0
Hist1h1aP43275 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Hist1h1aP43275 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Hist1h1aP43275 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms