Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
LdlrP35951 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LdlrP35951 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
LdlrP35951 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
LdlrP35951 Gm12933-201ENSMUST00000120203 872 ntBASIC18.2■□□□□ 0.5
LdlrP35951 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
LdlrP35951 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LdlrP35951 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LdlrP35951 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
LdlrP35951 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
LdlrP35951 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LdlrP35951 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LdlrP35951 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
LdlrP35951 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC18.2■□□□□ 0.5
LdlrP35951 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC18.2■□□□□ 0.5
LdlrP35951 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC18.19■□□□□ 0.5
LdlrP35951 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LdlrP35951 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
LdlrP35951 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LdlrP35951 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
LdlrP35951 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LdlrP35951 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LdlrP35951 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
LdlrP35951 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC18.19■□□□□ 0.5
LdlrP35951 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC18.19■□□□□ 0.5
LdlrP35951 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LdlrP35951 Gm10602-201ENSMUST00000098239 609 ntBASIC18.19■□□□□ 0.5
LdlrP35951 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
LdlrP35951 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC18.19■□□□□ 0.5
LdlrP35951 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
LdlrP35951 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LdlrP35951 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LdlrP35951 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC18.18■□□□□ 0.5
LdlrP35951 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
LdlrP35951 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
LdlrP35951 Gm11421-201ENSMUST00000122124 294 ntBASIC18.18■□□□□ 0.5
LdlrP35951 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC18.18■□□□□ 0.5
LdlrP35951 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
LdlrP35951 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
LdlrP35951 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LdlrP35951 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
LdlrP35951 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
LdlrP35951 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LdlrP35951 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
LdlrP35951 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LdlrP35951 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
LdlrP35951 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC18.17■□□□□ 0.5
LdlrP35951 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LdlrP35951 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
LdlrP35951 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC18.17■□□□□ 0.5
LdlrP35951 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LdlrP35951 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
LdlrP35951 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LdlrP35951 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LdlrP35951 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
LdlrP35951 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC18.17■□□□□ 0.5
LdlrP35951 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC18.17■□□□□ 0.5
LdlrP35951 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
LdlrP35951 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
LdlrP35951 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
LdlrP35951 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LdlrP35951 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
LdlrP35951 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
LdlrP35951 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
LdlrP35951 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
LdlrP35951 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LdlrP35951 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC18.16■□□□□ 0.5
LdlrP35951 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC18.16■□□□□ 0.5
LdlrP35951 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC18.16■□□□□ 0.5
LdlrP35951 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
LdlrP35951 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LdlrP35951 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC18.16■□□□□ 0.5
LdlrP35951 Gm27801-201ENSMUST00000184174 223 ntBASIC18.16■□□□□ 0.5
LdlrP35951 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
LdlrP35951 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
LdlrP35951 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LdlrP35951 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LdlrP35951 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LdlrP35951 Gm43702-201ENSMUST00000198772 2546 ntBASIC18.16■□□□□ 0.5
LdlrP35951 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LdlrP35951 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LdlrP35951 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LdlrP35951 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC18.15■□□□□ 0.5
LdlrP35951 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
LdlrP35951 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LdlrP35951 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LdlrP35951 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
LdlrP35951 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LdlrP35951 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
LdlrP35951 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC18.15■□□□□ 0.5
LdlrP35951 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC18.15■□□□□ 0.5
LdlrP35951 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
LdlrP35951 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
LdlrP35951 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
LdlrP35951 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LdlrP35951 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LdlrP35951 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LdlrP35951 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
LdlrP35951 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.5
LdlrP35951 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms