Protein–RNA interactions for Protein: P28862

Mmp3, Stromelysin-1, mousemouse

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp3P28862 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC19.68■□□□□ 0.74
Mmp3P28862 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Mmp3P28862 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Mmp3P28862 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Mmp3P28862 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Mmp3P28862 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Mmp3P28862 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Mmp3P28862 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Mmp3P28862 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Mmp3P28862 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC19.67■□□□□ 0.74
Mmp3P28862 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Mmp3P28862 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Mmp3P28862 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Mmp3P28862 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Mmp3P28862 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Mmp3P28862 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Mmp3P28862 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC19.67■□□□□ 0.74
Mmp3P28862 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC19.66■□□□□ 0.74
Mmp3P28862 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Mmp3P28862 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Mmp3P28862 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Mmp3P28862 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC19.66■□□□□ 0.74
Mmp3P28862 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Mmp3P28862 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Mmp3P28862 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Mmp3P28862 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Mmp3P28862 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Mmp3P28862 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC19.66■□□□□ 0.74
Mmp3P28862 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Mmp3P28862 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Mmp3P28862 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Mmp3P28862 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Mmp3P28862 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Mmp3P28862 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Mmp3P28862 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC19.65■□□□□ 0.74
Mmp3P28862 Gm10138-203ENSMUST00000206952 366 ntBASIC19.65■□□□□ 0.74
Mmp3P28862 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Mmp3P28862 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Mmp3P28862 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Mmp3P28862 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Mmp3P28862 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Mmp3P28862 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Mmp3P28862 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Mmp3P28862 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Mmp3P28862 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Mmp3P28862 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Mmp3P28862 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Mmp3P28862 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Mmp3P28862 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC19.64■□□□□ 0.73
Mmp3P28862 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Mmp3P28862 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Mmp3P28862 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC19.64■□□□□ 0.73
Mmp3P28862 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC19.64■□□□□ 0.73
Mmp3P28862 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Mmp3P28862 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Mmp3P28862 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Mmp3P28862 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Mmp3P28862 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Mmp3P28862 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Mmp3P28862 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC19.63■□□□□ 0.73
Mmp3P28862 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Mmp3P28862 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Mmp3P28862 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Mmp3P28862 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Mmp3P28862 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Mmp3P28862 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Mmp3P28862 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Mmp3P28862 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Mmp3P28862 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC19.62■□□□□ 0.73
Mmp3P28862 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC19.62■□□□□ 0.73
Mmp3P28862 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Mmp3P28862 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Mmp3P28862 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Mmp3P28862 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC19.61■□□□□ 0.73
Mmp3P28862 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Mmp3P28862 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Mmp3P28862 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Mmp3P28862 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Mmp3P28862 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Mmp3P28862 Gm44544-201ENSMUST00000207052 1844 ntBASIC19.61■□□□□ 0.73
Mmp3P28862 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Mmp3P28862 Gm15375-201ENSMUST00000119510 849 ntBASIC19.61■□□□□ 0.73
Mmp3P28862 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Mmp3P28862 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Mmp3P28862 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Mmp3P28862 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Mmp3P28862 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Mmp3P28862 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Mmp3P28862 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Mmp3P28862 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Mmp3P28862 Gm45560-201ENSMUST00000211492 1472 ntBASIC19.6■□□□□ 0.73
Mmp3P28862 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Mmp3P28862 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC19.6■□□□□ 0.73
Mmp3P28862 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Mmp3P28862 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Mmp3P28862 Gm37055-201ENSMUST00000191866 133 ntBASIC19.6■□□□□ 0.73
Mmp3P28862 Gm9484-201ENSMUST00000195892 1159 ntBASIC19.6■□□□□ 0.73
Mmp3P28862 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Mmp3P28862 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Mmp3P28862 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms