Protein–RNA interactions for Protein: P27659

Rpl3, 60S ribosomal protein L3, mousemouse

Known RBP Predictions only

Length 403 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl3P27659 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC17.43■□□□□ 0.38
Rpl3P27659 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rpl3P27659 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rpl3P27659 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rpl3P27659 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rpl3P27659 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Rpl3P27659 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rpl3P27659 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Rpl3P27659 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC17.42■□□□□ 0.38
Rpl3P27659 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rpl3P27659 Gm8309-201ENSMUST00000206627 1448 ntBASIC17.42■□□□□ 0.38
Rpl3P27659 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rpl3P27659 Gm42778-201ENSMUST00000199644 553 ntBASIC17.42■□□□□ 0.38
Rpl3P27659 AC160393.1-201ENSMUST00000218378 1279 ntBASIC17.42■□□□□ 0.38
Rpl3P27659 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Rpl3P27659 Gm42922-201ENSMUST00000195887 2078 ntBASIC17.42■□□□□ 0.38
Rpl3P27659 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rpl3P27659 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC17.42■□□□□ 0.38
Rpl3P27659 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC17.42■□□□□ 0.38
Rpl3P27659 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
Rpl3P27659 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Rpl3P27659 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rpl3P27659 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Rpl3P27659 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rpl3P27659 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Rpl3P27659 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC17.41■□□□□ 0.38
Rpl3P27659 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Rpl3P27659 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rpl3P27659 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rpl3P27659 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rpl3P27659 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rpl3P27659 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Rpl3P27659 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
Rpl3P27659 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Rpl3P27659 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC17.4■□□□□ 0.38
Rpl3P27659 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rpl3P27659 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rpl3P27659 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Rpl3P27659 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rpl3P27659 AC107452.1-201ENSMUST00000227963 481 ntBASIC17.4■□□□□ 0.38
Rpl3P27659 Dmtn-210ENSMUST00000228824 2377 ntBASIC17.4■□□□□ 0.38
Rpl3P27659 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rpl3P27659 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Rpl3P27659 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rpl3P27659 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Rpl3P27659 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Rpl3P27659 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Rpl3P27659 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rpl3P27659 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Rpl3P27659 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Rpl3P27659 Gm10493-201ENSMUST00000097270 612 ntBASIC17.39■□□□□ 0.37
Rpl3P27659 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rpl3P27659 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rpl3P27659 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
Rpl3P27659 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.37
Rpl3P27659 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rpl3P27659 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC17.39■□□□□ 0.37
Rpl3P27659 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rpl3P27659 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rpl3P27659 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rpl3P27659 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rpl3P27659 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rpl3P27659 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rpl3P27659 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rpl3P27659 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
Rpl3P27659 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rpl3P27659 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Rpl3P27659 Gm35558-201ENSMUST00000222675 2219 ntBASIC17.37■□□□□ 0.37
Rpl3P27659 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rpl3P27659 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rpl3P27659 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rpl3P27659 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC17.37■□□□□ 0.37
Rpl3P27659 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rpl3P27659 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rpl3P27659 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rpl3P27659 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rpl3P27659 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rpl3P27659 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rpl3P27659 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rpl3P27659 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Rpl3P27659 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC17.37■□□□□ 0.37
Rpl3P27659 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rpl3P27659 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rpl3P27659 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rpl3P27659 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Rpl3P27659 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rpl3P27659 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rpl3P27659 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rpl3P27659 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rpl3P27659 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC17.36■□□□□ 0.37
Rpl3P27659 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rpl3P27659 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rpl3P27659 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rpl3P27659 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC17.36■□□□□ 0.37
Rpl3P27659 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rpl3P27659 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rpl3P27659 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Rpl3P27659 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rpl3P27659 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rpl3P27659 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 65.7 ms