Protein–RNA interactions for Protein: P27048

Snrpb, Small nuclear ribonucleoprotein-associated protein B, mousemouse

Known RBP Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SnrpbP27048 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SnrpbP27048 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SnrpbP27048 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
SnrpbP27048 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
SnrpbP27048 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
SnrpbP27048 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SnrpbP27048 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SnrpbP27048 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SnrpbP27048 Gm5898-201ENSMUST00000121016 2071 ntBASIC16.07■□□□□ 0.16
SnrpbP27048 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SnrpbP27048 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SnrpbP27048 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SnrpbP27048 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC16.07■□□□□ 0.16
SnrpbP27048 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
SnrpbP27048 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
SnrpbP27048 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SnrpbP27048 Gm6598-201ENSMUST00000202719 2615 ntBASIC16.06■□□□□ 0.16
SnrpbP27048 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SnrpbP27048 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
SnrpbP27048 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SnrpbP27048 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC16.06■□□□□ 0.16
SnrpbP27048 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC16.06■□□□□ 0.16
SnrpbP27048 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SnrpbP27048 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SnrpbP27048 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SnrpbP27048 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SnrpbP27048 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
SnrpbP27048 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC16.06■□□□□ 0.16
SnrpbP27048 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC16.06■□□□□ 0.16
SnrpbP27048 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SnrpbP27048 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
SnrpbP27048 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SnrpbP27048 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SnrpbP27048 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
SnrpbP27048 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SnrpbP27048 Gm15635-204ENSMUST00000208024 2539 ntBASIC16.06■□□□□ 0.16
SnrpbP27048 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SnrpbP27048 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SnrpbP27048 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SnrpbP27048 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
SnrpbP27048 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC16.05■□□□□ 0.16
SnrpbP27048 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SnrpbP27048 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SnrpbP27048 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
SnrpbP27048 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC16.05■□□□□ 0.16
SnrpbP27048 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
SnrpbP27048 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SnrpbP27048 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
SnrpbP27048 Gm43548-201ENSMUST00000197139 2353 ntBASIC16.05■□□□□ 0.16
SnrpbP27048 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SnrpbP27048 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
SnrpbP27048 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SnrpbP27048 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SnrpbP27048 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
SnrpbP27048 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SnrpbP27048 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SnrpbP27048 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
SnrpbP27048 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
SnrpbP27048 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC16.04■□□□□ 0.16
SnrpbP27048 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
SnrpbP27048 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
SnrpbP27048 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SnrpbP27048 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SnrpbP27048 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC16.04■□□□□ 0.16
SnrpbP27048 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC16.04■□□□□ 0.16
SnrpbP27048 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC16.04■□□□□ 0.16
SnrpbP27048 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC16.04■□□□□ 0.16
SnrpbP27048 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC16.04■□□□□ 0.16
SnrpbP27048 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC16.04■□□□□ 0.16
SnrpbP27048 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SnrpbP27048 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SnrpbP27048 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SnrpbP27048 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
SnrpbP27048 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
SnrpbP27048 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
SnrpbP27048 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SnrpbP27048 Shroom3-211ENSMUST00000225438 5742 ntBASIC16.03■□□□□ 0.16
SnrpbP27048 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SnrpbP27048 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SnrpbP27048 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SnrpbP27048 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SnrpbP27048 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
SnrpbP27048 Gm9954-202ENSMUST00000198686 4725 ntBASIC16.03■□□□□ 0.16
SnrpbP27048 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SnrpbP27048 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SnrpbP27048 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SnrpbP27048 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
SnrpbP27048 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
SnrpbP27048 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SnrpbP27048 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SnrpbP27048 Gm7860-201ENSMUST00000121190 879 ntBASIC16.03■□□□□ 0.16
SnrpbP27048 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
SnrpbP27048 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SnrpbP27048 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SnrpbP27048 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC16.03■□□□□ 0.16
SnrpbP27048 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SnrpbP27048 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
SnrpbP27048 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SnrpbP27048 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SnrpbP27048 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms