Protein–RNA interactions for Protein: P17095

Hmga1, High mobility group protein HMG-I/HMG-Y, mousemouse

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmga1P17095 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Hmga1P17095 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Hmga1P17095 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
Hmga1P17095 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Hmga1P17095 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Hmga1P17095 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Hmga1P17095 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Hmga1P17095 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Hmga1P17095 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Hmga1P17095 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Hmga1P17095 Gm44544-201ENSMUST00000207052 1844 ntBASIC18.8■□□□□ 0.6
Hmga1P17095 Gm6576-201ENSMUST00000169678 883 ntBASIC18.8■□□□□ 0.6
Hmga1P17095 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Hmga1P17095 Arhgef33-211ENSMUST00000225658 473 ntBASIC18.8■□□□□ 0.6
Hmga1P17095 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC18.8■□□□□ 0.6
Hmga1P17095 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Hmga1P17095 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Hmga1P17095 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Hmga1P17095 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Hmga1P17095 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Hmga1P17095 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Hmga1P17095 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Hmga1P17095 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC18.79■□□□□ 0.6
Hmga1P17095 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Hmga1P17095 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Hmga1P17095 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Hmga1P17095 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Hmga1P17095 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Hmga1P17095 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Hmga1P17095 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Hmga1P17095 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Hmga1P17095 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC18.78■□□□□ 0.6
Hmga1P17095 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Hmga1P17095 CT010444.2-201ENSMUST00000217877 1629 ntBASIC18.78■□□□□ 0.6
Hmga1P17095 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Hmga1P17095 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC18.78■□□□□ 0.6
Hmga1P17095 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Hmga1P17095 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Hmga1P17095 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC18.78■□□□□ 0.6
Hmga1P17095 Gm10138-203ENSMUST00000206952 366 ntBASIC18.78■□□□□ 0.6
Hmga1P17095 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Hmga1P17095 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Hmga1P17095 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Hmga1P17095 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Hmga1P17095 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Hmga1P17095 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Hmga1P17095 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Hmga1P17095 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Hmga1P17095 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC18.77■□□□□ 0.6
Hmga1P17095 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Hmga1P17095 Mir1199-201ENSMUST00000117015 119 ntBASIC18.77■□□□□ 0.6
Hmga1P17095 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC18.77■□□□□ 0.6
Hmga1P17095 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC18.77■□□□□ 0.6
Hmga1P17095 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Hmga1P17095 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Hmga1P17095 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Hmga1P17095 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Hmga1P17095 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Hmga1P17095 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Hmga1P17095 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Hmga1P17095 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Hmga1P17095 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Hmga1P17095 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Hmga1P17095 Gm45906-201ENSMUST00000208911 1430 ntBASIC18.76■□□□□ 0.59
Hmga1P17095 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Hmga1P17095 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Hmga1P17095 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC18.76■□□□□ 0.59
Hmga1P17095 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Hmga1P17095 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Hmga1P17095 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Hmga1P17095 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Hmga1P17095 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Hmga1P17095 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Hmga1P17095 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Hmga1P17095 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC18.75■□□□□ 0.59
Hmga1P17095 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Hmga1P17095 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Hmga1P17095 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC18.75■□□□□ 0.59
Hmga1P17095 Gm715-201ENSMUST00000117865 831 ntBASIC18.75■□□□□ 0.59
Hmga1P17095 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Hmga1P17095 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC18.75■□□□□ 0.59
Hmga1P17095 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC18.75■□□□□ 0.59
Hmga1P17095 Mir6982-201ENSMUST00000184354 68 ntBASIC18.75■□□□□ 0.59
Hmga1P17095 Gm29241-201ENSMUST00000189260 1096 ntBASIC18.75■□□□□ 0.59
Hmga1P17095 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Hmga1P17095 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Hmga1P17095 Gm45560-201ENSMUST00000211492 1472 ntBASIC18.75■□□□□ 0.59
Hmga1P17095 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Hmga1P17095 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Hmga1P17095 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC18.75■□□□□ 0.59
Hmga1P17095 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Hmga1P17095 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Hmga1P17095 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Hmga1P17095 Gm15375-201ENSMUST00000119510 849 ntBASIC18.74■□□□□ 0.59
Hmga1P17095 AL672049.1-201ENSMUST00000197943 91 ntBASIC18.74■□□□□ 0.59
Hmga1P17095 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Hmga1P17095 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Hmga1P17095 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Hmga1P17095 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Hmga1P17095 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms