Protein–RNA interactions for Protein: P13405

Rb1, Retinoblastoma-associated protein, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rb1P13405 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rb1P13405 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rb1P13405 AC131586.2-201ENSMUST00000228370 1512 ntBASIC18.63■□□□□ 0.57
Rb1P13405 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rb1P13405 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rb1P13405 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Rb1P13405 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rb1P13405 Cdkn3-203ENSMUST00000227149 1952 ntBASIC18.62■□□□□ 0.57
Rb1P13405 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Rb1P13405 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rb1P13405 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rb1P13405 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC18.62■□□□□ 0.57
Rb1P13405 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC18.62■□□□□ 0.57
Rb1P13405 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Rb1P13405 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rb1P13405 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rb1P13405 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rb1P13405 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rb1P13405 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rb1P13405 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rb1P13405 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rb1P13405 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rb1P13405 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rb1P13405 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rb1P13405 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rb1P13405 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Rb1P13405 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Rb1P13405 Gm5540-201ENSMUST00000131852 1848 ntBASIC18.61■□□□□ 0.57
Rb1P13405 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rb1P13405 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Rb1P13405 Gm37563-201ENSMUST00000192580 1513 ntBASIC18.61■□□□□ 0.57
Rb1P13405 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rb1P13405 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC18.61■□□□□ 0.57
Rb1P13405 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC18.61■□□□□ 0.57
Rb1P13405 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC18.61■□□□□ 0.57
Rb1P13405 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC18.61■□□□□ 0.57
Rb1P13405 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rb1P13405 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Rb1P13405 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rb1P13405 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rb1P13405 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rb1P13405 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Rb1P13405 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Rb1P13405 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rb1P13405 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rb1P13405 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rb1P13405 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rb1P13405 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Rb1P13405 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Rb1P13405 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Rb1P13405 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC18.6■□□□□ 0.57
Rb1P13405 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC18.6■□□□□ 0.57
Rb1P13405 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Rb1P13405 Gm22325-201ENSMUST00000158904 308 ntBASIC18.6■□□□□ 0.57
Rb1P13405 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Rb1P13405 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Rb1P13405 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Rb1P13405 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rb1P13405 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC18.6■□□□□ 0.57
Rb1P13405 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rb1P13405 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rb1P13405 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Rb1P13405 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rb1P13405 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rb1P13405 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rb1P13405 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC18.59■□□□□ 0.57
Rb1P13405 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Rb1P13405 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Rb1P13405 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rb1P13405 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Rb1P13405 Gm13181-201ENSMUST00000120117 1069 ntBASIC18.59■□□□□ 0.57
Rb1P13405 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC18.59■□□□□ 0.57
Rb1P13405 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rb1P13405 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rb1P13405 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rb1P13405 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Rb1P13405 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Rb1P13405 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Rb1P13405 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Rb1P13405 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
Rb1P13405 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Rb1P13405 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rb1P13405 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rb1P13405 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC18.58■□□□□ 0.56
Rb1P13405 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Rb1P13405 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Rb1P13405 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rb1P13405 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rb1P13405 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rb1P13405 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rb1P13405 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rb1P13405 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rb1P13405 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Rb1P13405 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rb1P13405 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC18.57■□□□□ 0.56
Rb1P13405 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Rb1P13405 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Rb1P13405 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rb1P13405 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Rb1P13405 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms