Protein–RNA interactions for Protein: P11416

Rara, Retinoic acid receptor alpha, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RaraP11416 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC19.81■□□□□ 0.76
RaraP11416 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RaraP11416 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
RaraP11416 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC19.81■□□□□ 0.76
RaraP11416 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RaraP11416 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RaraP11416 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
RaraP11416 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RaraP11416 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
RaraP11416 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RaraP11416 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RaraP11416 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC19.8■□□□□ 0.76
RaraP11416 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RaraP11416 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
RaraP11416 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RaraP11416 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RaraP11416 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
RaraP11416 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RaraP11416 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RaraP11416 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC19.8■□□□□ 0.76
RaraP11416 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RaraP11416 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
RaraP11416 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RaraP11416 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RaraP11416 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
RaraP11416 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
RaraP11416 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
RaraP11416 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RaraP11416 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC19.8■□□□□ 0.76
RaraP11416 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RaraP11416 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RaraP11416 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RaraP11416 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RaraP11416 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RaraP11416 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RaraP11416 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RaraP11416 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RaraP11416 Gm13234-201ENSMUST00000120010 747 ntBASIC19.79■□□□□ 0.76
RaraP11416 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RaraP11416 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC19.79■□□□□ 0.76
RaraP11416 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
RaraP11416 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
RaraP11416 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RaraP11416 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
RaraP11416 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RaraP11416 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RaraP11416 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RaraP11416 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
RaraP11416 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RaraP11416 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
RaraP11416 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC19.78■□□□□ 0.76
RaraP11416 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
RaraP11416 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
RaraP11416 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RaraP11416 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
RaraP11416 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
RaraP11416 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC19.78■□□□□ 0.76
RaraP11416 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RaraP11416 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RaraP11416 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
RaraP11416 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RaraP11416 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
RaraP11416 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RaraP11416 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
RaraP11416 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RaraP11416 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC19.78■□□□□ 0.76
RaraP11416 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RaraP11416 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
RaraP11416 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RaraP11416 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC19.77■□□□□ 0.76
RaraP11416 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
RaraP11416 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
RaraP11416 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RaraP11416 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
RaraP11416 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
RaraP11416 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
RaraP11416 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
RaraP11416 Gm10129-202ENSMUST00000193100 1316 ntBASIC19.76■□□□□ 0.75
RaraP11416 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
RaraP11416 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
RaraP11416 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RaraP11416 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RaraP11416 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RaraP11416 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC19.76■□□□□ 0.75
RaraP11416 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC19.76■□□□□ 0.75
RaraP11416 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RaraP11416 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC19.76■□□□□ 0.75
RaraP11416 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RaraP11416 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
RaraP11416 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RaraP11416 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RaraP11416 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RaraP11416 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
RaraP11416 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
RaraP11416 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RaraP11416 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC19.75■□□□□ 0.75
RaraP11416 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RaraP11416 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
RaraP11416 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
RaraP11416 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms