Protein–RNA interactions for Protein: P10629

Hoxc6, Homeobox protein Hox-C6, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc6P10629 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Hoxc6P10629 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Hoxc6P10629 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
Hoxc6P10629 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Hoxc6P10629 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC20.44■□□□□ 0.86
Hoxc6P10629 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Hoxc6P10629 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Hoxc6P10629 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Hoxc6P10629 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Hoxc6P10629 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Hoxc6P10629 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC20.43■□□□□ 0.86
Hoxc6P10629 Gm11539-201ENSMUST00000119837 557 ntBASIC20.43■□□□□ 0.86
Hoxc6P10629 Gm13436-201ENSMUST00000120418 567 ntBASIC20.43■□□□□ 0.86
Hoxc6P10629 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Hoxc6P10629 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Hoxc6P10629 Gm3375-201ENSMUST00000203929 796 ntBASIC20.43■□□□□ 0.86
Hoxc6P10629 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Hoxc6P10629 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Hoxc6P10629 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Hoxc6P10629 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC20.43■□□□□ 0.86
Hoxc6P10629 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC20.42■□□□□ 0.86
Hoxc6P10629 Timm23-208ENSMUST00000226683 750 ntBASIC20.42■□□□□ 0.86
Hoxc6P10629 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Hoxc6P10629 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Hoxc6P10629 Hsf1-204ENSMUST00000226872 2104 ntBASIC20.42■□□□□ 0.86
Hoxc6P10629 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Hoxc6P10629 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Hoxc6P10629 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC20.42■□□□□ 0.86
Hoxc6P10629 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Hoxc6P10629 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Hoxc6P10629 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Hoxc6P10629 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC20.41■□□□□ 0.86
Hoxc6P10629 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Hoxc6P10629 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC20.41■□□□□ 0.86
Hoxc6P10629 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC20.41■□□□□ 0.86
Hoxc6P10629 Gm7712-202ENSMUST00000222331 1510 ntBASIC20.41■□□□□ 0.86
Hoxc6P10629 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Hoxc6P10629 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC20.41■□□□□ 0.86
Hoxc6P10629 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Hoxc6P10629 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Hoxc6P10629 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Hoxc6P10629 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Hoxc6P10629 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Hoxc6P10629 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Hoxc6P10629 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Hoxc6P10629 Mir6349-201ENSMUST00000184059 97 ntBASIC20.4■□□□□ 0.86
Hoxc6P10629 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Hoxc6P10629 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC20.4■□□□□ 0.86
Hoxc6P10629 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Hoxc6P10629 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC20.4■□□□□ 0.86
Hoxc6P10629 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Hoxc6P10629 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC20.39■□□□□ 0.86
Hoxc6P10629 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC20.39■□□□□ 0.86
Hoxc6P10629 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Hoxc6P10629 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Hoxc6P10629 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Hoxc6P10629 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Hoxc6P10629 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Hoxc6P10629 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Hoxc6P10629 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC20.38■□□□□ 0.85
Hoxc6P10629 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Hoxc6P10629 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC20.38■□□□□ 0.85
Hoxc6P10629 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Hoxc6P10629 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Hoxc6P10629 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Hoxc6P10629 AC124603.1-201ENSMUST00000223843 308 ntBASIC20.38■□□□□ 0.85
Hoxc6P10629 Golph3-202ENSMUST00000226517 2359 ntBASIC20.38■□□□□ 0.85
Hoxc6P10629 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Hoxc6P10629 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Hoxc6P10629 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Hoxc6P10629 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Hoxc6P10629 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Hoxc6P10629 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Hoxc6P10629 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Hoxc6P10629 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC20.37■□□□□ 0.85
Hoxc6P10629 Gm6659-201ENSMUST00000174752 547 ntBASIC20.37■□□□□ 0.85
Hoxc6P10629 Gm7889-201ENSMUST00000185591 958 ntBASIC20.37■□□□□ 0.85
Hoxc6P10629 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC20.37■□□□□ 0.85
Hoxc6P10629 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC20.37■□□□□ 0.85
Hoxc6P10629 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Hoxc6P10629 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Hoxc6P10629 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Hoxc6P10629 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Hoxc6P10629 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Hoxc6P10629 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Hoxc6P10629 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Hoxc6P10629 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Hoxc6P10629 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Hoxc6P10629 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Hoxc6P10629 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Hoxc6P10629 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC20.36■□□□□ 0.85
Hoxc6P10629 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Hoxc6P10629 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Hoxc6P10629 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC20.36■□□□□ 0.85
Hoxc6P10629 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC20.36■□□□□ 0.85
Hoxc6P10629 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Hoxc6P10629 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Hoxc6P10629 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC20.36■□□□□ 0.85
Hoxc6P10629 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC20.36■□□□□ 0.85
Hoxc6P10629 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms