Protein–RNA interactions for Protein: P04441

Cd74, H-2 class II histocompatibility antigen gamma chain, mousemouse

Predictions only

Length 279 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd74P04441 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cd74P04441 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Cd74P04441 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cd74P04441 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Cd74P04441 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Cd74P04441 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC15.35■□□□□ 0.05
Cd74P04441 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC15.35■□□□□ 0.05
Cd74P04441 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cd74P04441 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cd74P04441 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC15.35■□□□□ 0.05
Cd74P04441 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cd74P04441 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cd74P04441 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cd74P04441 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cd74P04441 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cd74P04441 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cd74P04441 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Cd74P04441 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cd74P04441 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cd74P04441 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC15.34■□□□□ 0.05
Cd74P04441 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cd74P04441 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Cd74P04441 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC15.34■□□□□ 0.05
Cd74P04441 Mir5133-201ENSMUST00000174955 77 ntBASIC15.34■□□□□ 0.05
Cd74P04441 CT025689.6-201ENSMUST00000224991 1104 ntBASIC15.34■□□□□ 0.05
Cd74P04441 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cd74P04441 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Cd74P04441 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cd74P04441 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cd74P04441 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cd74P04441 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Cd74P04441 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Cd74P04441 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
Cd74P04441 Gm37194-201ENSMUST00000193092 3031 ntBASIC15.33■□□□□ 0.05
Cd74P04441 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Cd74P04441 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cd74P04441 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC15.33■□□□□ 0.04
Cd74P04441 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cd74P04441 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Cd74P04441 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Cd74P04441 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cd74P04441 CT030146.1-201ENSMUST00000220919 217 ntBASIC15.33■□□□□ 0.04
Cd74P04441 AC112142.1-201ENSMUST00000228796 918 ntBASIC15.33■□□□□ 0.04
Cd74P04441 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Cd74P04441 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Cd74P04441 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cd74P04441 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Cd74P04441 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cd74P04441 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cd74P04441 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cd74P04441 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Cd74P04441 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Cd74P04441 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cd74P04441 Gm43702-201ENSMUST00000198772 2546 ntBASIC15.33■□□□□ 0.04
Cd74P04441 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Cd74P04441 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cd74P04441 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cd74P04441 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cd74P04441 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Cd74P04441 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cd74P04441 Gm13146-201ENSMUST00000118508 780 ntBASIC15.32■□□□□ 0.04
Cd74P04441 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Cd74P04441 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cd74P04441 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cd74P04441 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Cd74P04441 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Cd74P04441 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cd74P04441 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC15.32■□□□□ 0.04
Cd74P04441 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Cd74P04441 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cd74P04441 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cd74P04441 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Cd74P04441 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Cd74P04441 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cd74P04441 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cd74P04441 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cd74P04441 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC15.31■□□□□ 0.04
Cd74P04441 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Cd74P04441 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC15.31■□□□□ 0.04
Cd74P04441 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Cd74P04441 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
Cd74P04441 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC15.31■□□□□ 0.04
Cd74P04441 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cd74P04441 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Cd74P04441 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cd74P04441 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cd74P04441 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cd74P04441 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cd74P04441 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cd74P04441 Gm6802-201ENSMUST00000167843 1983 ntBASIC15.31■□□□□ 0.04
Cd74P04441 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC15.31■□□□□ 0.04
Cd74P04441 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cd74P04441 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cd74P04441 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cd74P04441 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cd74P04441 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cd74P04441 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Cd74P04441 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cd74P04441 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Cd74P04441 BC021767-201ENSMUST00000126387 1716 ntBASIC15.3■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms