Protein–RNA interactions for Protein: P04214

T-cell receptor beta chain V region E1, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04214 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
P04214 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC19.31■□□□□ 0.68
P04214 AA414768-201ENSMUST00000121924 1257 ntBASIC19.31■□□□□ 0.68
P04214 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC19.31■□□□□ 0.68
P04214 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC19.31■□□□□ 0.68
P04214 Gm45058-201ENSMUST00000205810 766 ntBASIC19.31■□□□□ 0.68
P04214 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
P04214 Gm44544-201ENSMUST00000207052 1844 ntBASIC19.3■□□□□ 0.68
P04214 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
P04214 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC19.3■□□□□ 0.68
P04214 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC19.3■□□□□ 0.68
P04214 AC124603.1-201ENSMUST00000223843 308 ntBASIC19.3■□□□□ 0.68
P04214 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC19.3■□□□□ 0.68
P04214 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
P04214 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC19.3■□□□□ 0.68
P04214 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
P04214 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
P04214 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
P04214 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
P04214 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
P04214 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
P04214 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
P04214 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
P04214 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
P04214 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
P04214 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
P04214 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC19.29■□□□□ 0.68
P04214 Gm37805-201ENSMUST00000192612 1094 ntBASIC19.29■□□□□ 0.68
P04214 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
P04214 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
P04214 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC19.29■□□□□ 0.68
P04214 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
P04214 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
P04214 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
P04214 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
P04214 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
P04214 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
P04214 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC19.28■□□□□ 0.68
P04214 Gm12085-201ENSMUST00000119263 940 ntBASIC19.28■□□□□ 0.68
P04214 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
P04214 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
P04214 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
P04214 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
P04214 Gm27463-201ENSMUST00000183569 57 ntBASIC19.28■□□□□ 0.68
P04214 Gm33142-201ENSMUST00000193913 867 ntBASIC19.28■□□□□ 0.68
P04214 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
P04214 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
P04214 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
P04214 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
P04214 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
P04214 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
P04214 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
P04214 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
P04214 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
P04214 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
P04214 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC19.27■□□□□ 0.68
P04214 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC19.27■□□□□ 0.68
P04214 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
P04214 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
P04214 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
P04214 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
P04214 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
P04214 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
P04214 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
P04214 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
P04214 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
P04214 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
P04214 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
P04214 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
P04214 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
P04214 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
P04214 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
P04214 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC19.25■□□□□ 0.67
P04214 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
P04214 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC19.25■□□□□ 0.67
P04214 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
P04214 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC19.25■□□□□ 0.67
P04214 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC19.25■□□□□ 0.67
P04214 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
P04214 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
P04214 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
P04214 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
P04214 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
P04214 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
P04214 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
P04214 Gm20634-201ENSMUST00000090779 2956 ntBASIC19.24■□□□□ 0.67
P04214 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
P04214 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
P04214 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
P04214 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
P04214 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
P04214 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
P04214 Gm43353-201ENSMUST00000199224 1295 ntBASIC19.24■□□□□ 0.67
P04214 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
P04214 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
P04214 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
P04214 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
P04214 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
P04214 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
P04214 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms