Protein–RNA interactions for Protein: P03980

Ig heavy chain V region TEPC 1017, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P03980 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
P03980 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
P03980 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
P03980 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
P03980 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
P03980 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
P03980 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
P03980 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC14.16□□□□□ -0.14
P03980 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
P03980 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
P03980 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
P03980 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
P03980 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
P03980 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
P03980 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
P03980 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
P03980 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
P03980 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
P03980 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
P03980 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
P03980 Gm11421-201ENSMUST00000122124 294 ntBASIC14.15□□□□□ -0.14
P03980 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC14.15□□□□□ -0.14
P03980 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC14.15□□□□□ -0.14
P03980 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
P03980 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
P03980 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC14.15□□□□□ -0.14
P03980 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
P03980 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
P03980 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
P03980 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
P03980 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
P03980 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
P03980 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
P03980 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
P03980 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
P03980 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
P03980 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
P03980 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
P03980 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
P03980 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
P03980 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
P03980 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
P03980 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC14.14□□□□□ -0.15
P03980 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
P03980 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
P03980 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
P03980 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
P03980 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC14.14□□□□□ -0.15
P03980 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
P03980 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
P03980 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
P03980 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
P03980 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
P03980 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
P03980 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
P03980 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
P03980 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
P03980 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC14.13□□□□□ -0.15
P03980 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
P03980 Gm38308-201ENSMUST00000194934 1809 ntBASIC14.13□□□□□ -0.15
P03980 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
P03980 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
P03980 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
P03980 Smad6-203ENSMUST00000179458 273 ntBASIC14.13□□□□□ -0.15
P03980 Gm27801-201ENSMUST00000184174 223 ntBASIC14.13□□□□□ -0.15
P03980 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
P03980 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC14.13□□□□□ -0.15
P03980 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
P03980 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
P03980 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
P03980 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
P03980 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
P03980 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC14.13□□□□□ -0.15
P03980 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
P03980 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
P03980 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
P03980 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
P03980 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
P03980 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
P03980 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
P03980 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
P03980 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
P03980 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
P03980 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
P03980 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC14.12□□□□□ -0.15
P03980 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC14.12□□□□□ -0.15
P03980 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC14.12□□□□□ -0.15
P03980 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
P03980 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
P03980 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
P03980 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
P03980 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
P03980 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
P03980 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
P03980 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC14.11□□□□□ -0.15
P03980 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
P03980 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
P03980 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
P03980 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
P03980 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms