Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TcraP01849 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
TcraP01849 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
TcraP01849 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC13.4□□□□□ -0.26
TcraP01849 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TcraP01849 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC13.4□□□□□ -0.26
TcraP01849 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC13.4□□□□□ -0.26
TcraP01849 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
TcraP01849 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TcraP01849 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
TcraP01849 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TcraP01849 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
TcraP01849 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
TcraP01849 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TcraP01849 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
TcraP01849 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
TcraP01849 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TcraP01849 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
TcraP01849 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TcraP01849 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
TcraP01849 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TcraP01849 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TcraP01849 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TcraP01849 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TcraP01849 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TcraP01849 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TcraP01849 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
TcraP01849 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TcraP01849 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
TcraP01849 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
TcraP01849 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
TcraP01849 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TcraP01849 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
TcraP01849 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
TcraP01849 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TcraP01849 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TcraP01849 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
TcraP01849 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TcraP01849 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC13.38□□□□□ -0.27
TcraP01849 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC13.38□□□□□ -0.27
TcraP01849 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TcraP01849 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TcraP01849 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TcraP01849 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC13.38□□□□□ -0.27
TcraP01849 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC13.38□□□□□ -0.27
TcraP01849 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC13.38□□□□□ -0.27
TcraP01849 Gm9870-201ENSMUST00000063874 645 ntBASIC13.38□□□□□ -0.27
TcraP01849 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
TcraP01849 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TcraP01849 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TcraP01849 Gm10571-201ENSMUST00000097869 1638 ntBASIC13.38□□□□□ -0.27
TcraP01849 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC13.38□□□□□ -0.27
TcraP01849 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
TcraP01849 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TcraP01849 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TcraP01849 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
TcraP01849 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
TcraP01849 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TcraP01849 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TcraP01849 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC13.37□□□□□ -0.27
TcraP01849 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TcraP01849 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TcraP01849 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
TcraP01849 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TcraP01849 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TcraP01849 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TcraP01849 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TcraP01849 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
TcraP01849 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TcraP01849 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TcraP01849 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TcraP01849 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
TcraP01849 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TcraP01849 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TcraP01849 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TcraP01849 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TcraP01849 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
TcraP01849 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TcraP01849 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TcraP01849 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TcraP01849 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TcraP01849 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC13.36□□□□□ -0.27
TcraP01849 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
TcraP01849 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TcraP01849 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TcraP01849 Gm32699-201ENSMUST00000221728 1988 ntBASIC13.36□□□□□ -0.27
TcraP01849 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TcraP01849 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
TcraP01849 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
TcraP01849 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
TcraP01849 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TcraP01849 AC121598.2-201ENSMUST00000228376 2325 ntBASIC13.35□□□□□ -0.27
TcraP01849 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TcraP01849 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
TcraP01849 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC13.35□□□□□ -0.27
TcraP01849 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
TcraP01849 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TcraP01849 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TcraP01849 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
TcraP01849 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC13.35□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms