Protein–RNA interactions for Protein: P01735

T-cell receptor beta chain V region 86T1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01735 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC16.83■□□□□ 0.28
P01735 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
P01735 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC16.83■□□□□ 0.28
P01735 Gm43182-201ENSMUST00000199476 2528 ntBASIC16.83■□□□□ 0.28
P01735 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC16.83■□□□□ 0.28
P01735 Gm7514-201ENSMUST00000209475 934 ntBASIC16.83■□□□□ 0.28
P01735 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
P01735 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
P01735 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
P01735 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
P01735 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
P01735 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
P01735 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
P01735 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
P01735 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
P01735 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
P01735 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
P01735 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC16.82■□□□□ 0.28
P01735 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
P01735 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
P01735 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
P01735 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC16.82■□□□□ 0.28
P01735 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
P01735 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
P01735 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
P01735 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
P01735 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
P01735 Gm43672-201ENSMUST00000199072 1731 ntBASIC16.82■□□□□ 0.28
P01735 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC16.81■□□□□ 0.28
P01735 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
P01735 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
P01735 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
P01735 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
P01735 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
P01735 Gm18671-201ENSMUST00000214826 683 ntBASIC16.81■□□□□ 0.28
P01735 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
P01735 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
P01735 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
P01735 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
P01735 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
P01735 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
P01735 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
P01735 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
P01735 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC16.8■□□□□ 0.28
P01735 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC16.8■□□□□ 0.28
P01735 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
P01735 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
P01735 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
P01735 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
P01735 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
P01735 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
P01735 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
P01735 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
P01735 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC16.79■□□□□ 0.28
P01735 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
P01735 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
P01735 AC160393.1-201ENSMUST00000218378 1279 ntBASIC16.79■□□□□ 0.28
P01735 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
P01735 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
P01735 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
P01735 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
P01735 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
P01735 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
P01735 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC16.78■□□□□ 0.28
P01735 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
P01735 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
P01735 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
P01735 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
P01735 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
P01735 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
P01735 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
P01735 Gm26571-201ENSMUST00000181399 666 ntBASIC16.78■□□□□ 0.28
P01735 AV356131-201ENSMUST00000206201 750 ntBASIC16.78■□□□□ 0.28
P01735 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC16.78■□□□□ 0.28
P01735 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
P01735 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC16.78■□□□□ 0.28
P01735 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
P01735 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
P01735 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
P01735 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
P01735 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
P01735 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
P01735 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC16.77■□□□□ 0.28
P01735 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
P01735 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
P01735 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
P01735 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
P01735 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
P01735 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
P01735 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
P01735 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
P01735 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
P01735 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
P01735 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
P01735 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
P01735 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC16.77■□□□□ 0.28
P01735 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
P01735 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC16.77■□□□□ 0.28
P01735 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC16.77■□□□□ 0.28
P01735 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms