Protein–RNA interactions for Protein: P01139

Ngf, Beta-nerve growth factor, mousemouse

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NgfP01139 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
NgfP01139 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NgfP01139 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
NgfP01139 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC16.26■□□□□ 0.19
NgfP01139 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
NgfP01139 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
NgfP01139 Gm42545-201ENSMUST00000202755 922 ntBASIC16.26■□□□□ 0.19
NgfP01139 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NgfP01139 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NgfP01139 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC16.26■□□□□ 0.19
NgfP01139 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NgfP01139 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NgfP01139 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NgfP01139 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NgfP01139 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NgfP01139 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NgfP01139 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NgfP01139 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NgfP01139 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NgfP01139 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
NgfP01139 Gm37292-201ENSMUST00000192062 758 ntBASIC16.25■□□□□ 0.19
NgfP01139 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC16.25■□□□□ 0.19
NgfP01139 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC16.25■□□□□ 0.19
NgfP01139 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
NgfP01139 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NgfP01139 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
NgfP01139 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
NgfP01139 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
NgfP01139 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
NgfP01139 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC16.25■□□□□ 0.19
NgfP01139 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
NgfP01139 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NgfP01139 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC16.24■□□□□ 0.19
NgfP01139 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
NgfP01139 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC16.24■□□□□ 0.19
NgfP01139 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NgfP01139 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NgfP01139 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
NgfP01139 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
NgfP01139 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
NgfP01139 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NgfP01139 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
NgfP01139 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NgfP01139 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC16.23■□□□□ 0.19
NgfP01139 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
NgfP01139 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
NgfP01139 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
NgfP01139 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
NgfP01139 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
NgfP01139 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
NgfP01139 Gm16042-201ENSMUST00000204813 1247 ntBASIC16.23■□□□□ 0.19
NgfP01139 AC153881.2-201ENSMUST00000214877 204 ntBASIC16.23■□□□□ 0.19
NgfP01139 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NgfP01139 Gm9987-201ENSMUST00000069768 567 ntBASIC16.23■□□□□ 0.19
NgfP01139 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NgfP01139 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
NgfP01139 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
NgfP01139 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
NgfP01139 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
NgfP01139 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC16.23■□□□□ 0.19
NgfP01139 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NgfP01139 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC16.22■□□□□ 0.19
NgfP01139 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
NgfP01139 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
NgfP01139 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
NgfP01139 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
NgfP01139 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NgfP01139 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NgfP01139 Gm6433-201ENSMUST00000118634 875 ntBASIC16.22■□□□□ 0.19
NgfP01139 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC16.22■□□□□ 0.19
NgfP01139 Odf3b-204ENSMUST00000227834 930 ntBASIC16.22■□□□□ 0.19
NgfP01139 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NgfP01139 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC16.22■□□□□ 0.19
NgfP01139 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NgfP01139 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NgfP01139 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC16.22■□□□□ 0.19
NgfP01139 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NgfP01139 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NgfP01139 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
NgfP01139 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NgfP01139 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NgfP01139 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC16.21■□□□□ 0.19
NgfP01139 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
NgfP01139 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
NgfP01139 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
NgfP01139 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NgfP01139 Gm43799-201ENSMUST00000201845 579 ntBASIC16.21■□□□□ 0.19
NgfP01139 Arhgef4-208ENSMUST00000211073 171 ntBASIC16.21■□□□□ 0.19
NgfP01139 AC121577.1-201ENSMUST00000227302 707 ntBASIC16.21■□□□□ 0.19
NgfP01139 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NgfP01139 Gm20634-201ENSMUST00000090779 2956 ntBASIC16.21■□□□□ 0.19
NgfP01139 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
NgfP01139 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NgfP01139 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC16.21■□□□□ 0.18
NgfP01139 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
NgfP01139 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
NgfP01139 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
NgfP01139 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC16.2■□□□□ 0.18
NgfP01139 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
NgfP01139 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms