Protein–RNA interactions for Protein: O88384

Vti1b, Vesicle transport through interaction with t-SNAREs homolog 1B, mousemouse

Predictions only

Length 232 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1bO88384 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Vti1bO88384 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC17.46■□□□□ 0.39
Vti1bO88384 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Vti1bO88384 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Vti1bO88384 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Vti1bO88384 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Vti1bO88384 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Vti1bO88384 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Vti1bO88384 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Vti1bO88384 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC17.45■□□□□ 0.38
Vti1bO88384 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Vti1bO88384 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Vti1bO88384 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Vti1bO88384 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Vti1bO88384 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
Vti1bO88384 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Vti1bO88384 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Vti1bO88384 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Vti1bO88384 Gm15853-202ENSMUST00000195518 2041 ntBASIC17.45■□□□□ 0.38
Vti1bO88384 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Vti1bO88384 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Vti1bO88384 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Vti1bO88384 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC17.44■□□□□ 0.38
Vti1bO88384 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Vti1bO88384 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Vti1bO88384 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC17.44■□□□□ 0.38
Vti1bO88384 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Vti1bO88384 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Vti1bO88384 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Vti1bO88384 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC17.44■□□□□ 0.38
Vti1bO88384 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC17.44■□□□□ 0.38
Vti1bO88384 Gm10493-201ENSMUST00000097270 612 ntBASIC17.44■□□□□ 0.38
Vti1bO88384 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Vti1bO88384 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Vti1bO88384 Gm10129-202ENSMUST00000193100 1316 ntBASIC17.44■□□□□ 0.38
Vti1bO88384 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Vti1bO88384 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Vti1bO88384 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Vti1bO88384 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Vti1bO88384 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC17.43■□□□□ 0.38
Vti1bO88384 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Vti1bO88384 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Vti1bO88384 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Vti1bO88384 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Vti1bO88384 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Vti1bO88384 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Vti1bO88384 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Vti1bO88384 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC17.43■□□□□ 0.38
Vti1bO88384 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Vti1bO88384 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Vti1bO88384 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC17.43■□□□□ 0.38
Vti1bO88384 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Vti1bO88384 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Vti1bO88384 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
Vti1bO88384 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Vti1bO88384 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Vti1bO88384 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC17.43■□□□□ 0.38
Vti1bO88384 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Vti1bO88384 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Vti1bO88384 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC17.42■□□□□ 0.38
Vti1bO88384 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC17.42■□□□□ 0.38
Vti1bO88384 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Vti1bO88384 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Vti1bO88384 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Vti1bO88384 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Vti1bO88384 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Vti1bO88384 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Vti1bO88384 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC17.42■□□□□ 0.38
Vti1bO88384 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Vti1bO88384 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Vti1bO88384 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Vti1bO88384 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Vti1bO88384 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Vti1bO88384 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC17.41■□□□□ 0.38
Vti1bO88384 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Vti1bO88384 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Vti1bO88384 Dmtn-207ENSMUST00000228001 2437 ntBASIC17.41■□□□□ 0.38
Vti1bO88384 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Vti1bO88384 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Vti1bO88384 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Vti1bO88384 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Vti1bO88384 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Vti1bO88384 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Vti1bO88384 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Vti1bO88384 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
Vti1bO88384 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Vti1bO88384 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Vti1bO88384 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Vti1bO88384 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Vti1bO88384 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Vti1bO88384 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Vti1bO88384 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC17.4■□□□□ 0.38
Vti1bO88384 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Vti1bO88384 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Vti1bO88384 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Vti1bO88384 AC123834.2-201ENSMUST00000224038 2340 ntBASIC17.4■□□□□ 0.38
Vti1bO88384 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Vti1bO88384 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC17.4■□□□□ 0.38
Vti1bO88384 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
Vti1bO88384 Gm9988-201ENSMUST00000069786 435 ntBASIC17.4■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms