Protein–RNA interactions for Protein: O88245

Gm10139, Mszf85 (Fragment), mousemouse

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm10139O88245 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Gm10139O88245 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Gm10139O88245 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Gm10139O88245 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Gm10139O88245 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Gm10139O88245 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Gm10139O88245 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC11.19□□□□□ -0.62
Gm10139O88245 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC11.18□□□□□ -0.62
Gm10139O88245 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Gm10139O88245 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Gm10139O88245 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Gm10139O88245 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC11.18□□□□□ -0.62
Gm10139O88245 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Gm10139O88245 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Gm10139O88245 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Gm10139O88245 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Gm10139O88245 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC11.18□□□□□ -0.62
Gm10139O88245 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC11.18□□□□□ -0.62
Gm10139O88245 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC11.18□□□□□ -0.62
Gm10139O88245 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Gm10139O88245 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC11.18□□□□□ -0.62
Gm10139O88245 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC11.18□□□□□ -0.62
Gm10139O88245 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Gm10139O88245 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Gm10139O88245 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Gm10139O88245 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Gm10139O88245 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Gm10139O88245 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Gm10139O88245 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC11.18□□□□□ -0.62
Gm10139O88245 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Gm10139O88245 Reep4-203ENSMUST00000226563 1444 ntBASIC11.18□□□□□ -0.62
Gm10139O88245 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Gm10139O88245 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Gm10139O88245 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Gm10139O88245 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Gm10139O88245 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Gm10139O88245 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Gm10139O88245 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Gm10139O88245 Tgds-204ENSMUST00000228543 1594 ntBASIC11.17□□□□□ -0.62
Gm10139O88245 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC11.17□□□□□ -0.62
Gm10139O88245 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC11.17□□□□□ -0.62
Gm10139O88245 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC11.17□□□□□ -0.62
Gm10139O88245 Gm21168-201ENSMUST00000199646 1096 ntBASIC11.17□□□□□ -0.62
Gm10139O88245 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Gm10139O88245 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC11.17□□□□□ -0.62
Gm10139O88245 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Gm10139O88245 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Gm10139O88245 Gm9988-201ENSMUST00000069786 435 ntBASIC11.17□□□□□ -0.62
Gm10139O88245 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Gm10139O88245 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Gm10139O88245 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Gm10139O88245 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Gm10139O88245 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Gm10139O88245 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC11.17□□□□□ -0.62
Gm10139O88245 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Gm10139O88245 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Gm10139O88245 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Gm10139O88245 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Gm10139O88245 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Gm10139O88245 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Gm10139O88245 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Gm10139O88245 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC11.16□□□□□ -0.62
Gm10139O88245 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Gm10139O88245 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Gm10139O88245 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Gm10139O88245 Gm37811-201ENSMUST00000192416 2601 ntBASIC11.16□□□□□ -0.62
Gm10139O88245 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Gm10139O88245 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Gm10139O88245 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Gm10139O88245 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Gm10139O88245 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Gm10139O88245 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Gm10139O88245 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC11.16□□□□□ -0.62
Gm10139O88245 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Gm10139O88245 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Gm10139O88245 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Gm10139O88245 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Gm10139O88245 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Gm10139O88245 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Gm10139O88245 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Gm10139O88245 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Gm10139O88245 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Gm10139O88245 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Gm10139O88245 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC11.15□□□□□ -0.62
Gm10139O88245 Fst-202ENSMUST00000223640 2612 ntBASIC11.15□□□□□ -0.62
Gm10139O88245 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Gm10139O88245 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Gm10139O88245 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Gm10139O88245 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Gm10139O88245 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC11.15□□□□□ -0.62
Gm10139O88245 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Gm10139O88245 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC11.15□□□□□ -0.62
Gm10139O88245 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Gm10139O88245 AC160393.1-201ENSMUST00000218378 1279 ntBASIC11.15□□□□□ -0.62
Gm10139O88245 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Gm10139O88245 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Gm10139O88245 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Gm10139O88245 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Gm10139O88245 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Gm10139O88245 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms