Protein–RNA interactions for Protein: O70209

Pdlim3, PDZ and LIM domain protein 3, mousemouse

Known RBP Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim3O70209 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pdlim3O70209 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Pdlim3O70209 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pdlim3O70209 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pdlim3O70209 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pdlim3O70209 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Pdlim3O70209 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
Pdlim3O70209 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pdlim3O70209 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pdlim3O70209 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Pdlim3O70209 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pdlim3O70209 Gm9194-201ENSMUST00000220749 1447 ntBASIC16.61■□□□□ 0.25
Pdlim3O70209 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pdlim3O70209 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pdlim3O70209 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Pdlim3O70209 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pdlim3O70209 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Pdlim3O70209 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pdlim3O70209 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC16.6■□□□□ 0.25
Pdlim3O70209 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pdlim3O70209 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Pdlim3O70209 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pdlim3O70209 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Pdlim3O70209 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pdlim3O70209 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pdlim3O70209 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Pdlim3O70209 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pdlim3O70209 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pdlim3O70209 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pdlim3O70209 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pdlim3O70209 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC16.6■□□□□ 0.25
Pdlim3O70209 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC16.6■□□□□ 0.25
Pdlim3O70209 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pdlim3O70209 Gm19439-201ENSMUST00000198195 2273 ntBASIC16.59■□□□□ 0.25
Pdlim3O70209 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Pdlim3O70209 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pdlim3O70209 Mir7075-201ENSMUST00000184187 82 ntBASIC16.59■□□□□ 0.25
Pdlim3O70209 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC16.59■□□□□ 0.25
Pdlim3O70209 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Pdlim3O70209 AC140930.3-201ENSMUST00000222935 274 ntBASIC16.59■□□□□ 0.25
Pdlim3O70209 Wdr70-203ENSMUST00000227371 1130 ntBASIC16.59■□□□□ 0.25
Pdlim3O70209 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pdlim3O70209 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Pdlim3O70209 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Pdlim3O70209 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
Pdlim3O70209 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC16.59■□□□□ 0.25
Pdlim3O70209 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pdlim3O70209 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pdlim3O70209 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pdlim3O70209 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Pdlim3O70209 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Pdlim3O70209 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC16.59■□□□□ 0.25
Pdlim3O70209 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pdlim3O70209 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Pdlim3O70209 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pdlim3O70209 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Pdlim3O70209 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pdlim3O70209 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pdlim3O70209 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Pdlim3O70209 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Pdlim3O70209 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Pdlim3O70209 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pdlim3O70209 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pdlim3O70209 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pdlim3O70209 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC16.58■□□□□ 0.24
Pdlim3O70209 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pdlim3O70209 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pdlim3O70209 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pdlim3O70209 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pdlim3O70209 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pdlim3O70209 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pdlim3O70209 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pdlim3O70209 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Pdlim3O70209 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC16.57■□□□□ 0.24
Pdlim3O70209 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pdlim3O70209 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC16.57■□□□□ 0.24
Pdlim3O70209 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Pdlim3O70209 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pdlim3O70209 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pdlim3O70209 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC16.57■□□□□ 0.24
Pdlim3O70209 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pdlim3O70209 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC16.57■□□□□ 0.24
Pdlim3O70209 Gm38308-201ENSMUST00000194934 1809 ntBASIC16.56■□□□□ 0.24
Pdlim3O70209 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Pdlim3O70209 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
Pdlim3O70209 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Pdlim3O70209 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC16.56■□□□□ 0.24
Pdlim3O70209 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC16.56■□□□□ 0.24
Pdlim3O70209 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Pdlim3O70209 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Pdlim3O70209 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pdlim3O70209 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC16.56■□□□□ 0.24
Pdlim3O70209 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Pdlim3O70209 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pdlim3O70209 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Pdlim3O70209 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pdlim3O70209 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pdlim3O70209 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Pdlim3O70209 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pdlim3O70209 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms