Protein–RNA interactions for Protein: O55241

Hcrt, Orexin, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HcrtO55241 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC18.32■□□□□ 0.52
HcrtO55241 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HcrtO55241 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HcrtO55241 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HcrtO55241 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HcrtO55241 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HcrtO55241 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
HcrtO55241 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HcrtO55241 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
HcrtO55241 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HcrtO55241 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC18.31■□□□□ 0.52
HcrtO55241 Gm42555-201ENSMUST00000199304 1039 ntBASIC18.31■□□□□ 0.52
HcrtO55241 Gm6365-201ENSMUST00000054711 744 ntBASIC18.31■□□□□ 0.52
HcrtO55241 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
HcrtO55241 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
HcrtO55241 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HcrtO55241 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HcrtO55241 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
HcrtO55241 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
HcrtO55241 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
HcrtO55241 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
HcrtO55241 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
HcrtO55241 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
HcrtO55241 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
HcrtO55241 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
HcrtO55241 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC18.3■□□□□ 0.52
HcrtO55241 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
HcrtO55241 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HcrtO55241 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
HcrtO55241 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HcrtO55241 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
HcrtO55241 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
HcrtO55241 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
HcrtO55241 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
HcrtO55241 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
HcrtO55241 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
HcrtO55241 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HcrtO55241 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
HcrtO55241 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HcrtO55241 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
HcrtO55241 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HcrtO55241 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC18.29■□□□□ 0.52
HcrtO55241 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
HcrtO55241 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
HcrtO55241 Gm7291-201ENSMUST00000199147 382 ntBASIC18.29■□□□□ 0.52
HcrtO55241 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HcrtO55241 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
HcrtO55241 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HcrtO55241 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
HcrtO55241 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC18.29■□□□□ 0.52
HcrtO55241 AC121961.1-201ENSMUST00000218594 1779 ntBASIC18.29■□□□□ 0.52
HcrtO55241 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HcrtO55241 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC18.29■□□□□ 0.52
HcrtO55241 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC18.28■□□□□ 0.52
HcrtO55241 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
HcrtO55241 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC18.28■□□□□ 0.52
HcrtO55241 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
HcrtO55241 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
HcrtO55241 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
HcrtO55241 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HcrtO55241 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
HcrtO55241 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HcrtO55241 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HcrtO55241 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC18.28■□□□□ 0.52
HcrtO55241 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
HcrtO55241 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
HcrtO55241 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
HcrtO55241 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
HcrtO55241 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
HcrtO55241 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
HcrtO55241 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
HcrtO55241 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC18.27■□□□□ 0.52
HcrtO55241 AC160393.1-201ENSMUST00000218378 1279 ntBASIC18.27■□□□□ 0.52
HcrtO55241 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
HcrtO55241 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
HcrtO55241 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC18.27■□□□□ 0.52
HcrtO55241 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
HcrtO55241 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
HcrtO55241 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
HcrtO55241 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC18.27■□□□□ 0.51
HcrtO55241 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
HcrtO55241 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
HcrtO55241 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
HcrtO55241 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
HcrtO55241 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HcrtO55241 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC18.26■□□□□ 0.51
HcrtO55241 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC18.26■□□□□ 0.51
HcrtO55241 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
HcrtO55241 Gm37179-201ENSMUST00000194862 823 ntBASIC18.26■□□□□ 0.51
HcrtO55241 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC18.26■□□□□ 0.51
HcrtO55241 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
HcrtO55241 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HcrtO55241 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
HcrtO55241 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
HcrtO55241 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HcrtO55241 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
HcrtO55241 Gm37563-201ENSMUST00000192580 1513 ntBASIC18.25■□□□□ 0.51
HcrtO55241 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
HcrtO55241 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC18.25■□□□□ 0.51
HcrtO55241 Gm13148-201ENSMUST00000118892 745 ntBASIC18.25■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms