Protein–RNA interactions for Protein: O55057

Pde6d, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, mousemouse

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6dO55057 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC14.49□□□□□ -0.09
Pde6dO55057 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC14.49□□□□□ -0.09
Pde6dO55057 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Pde6dO55057 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC14.49□□□□□ -0.09
Pde6dO55057 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pde6dO55057 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC14.49□□□□□ -0.09
Pde6dO55057 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC14.49□□□□□ -0.09
Pde6dO55057 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pde6dO55057 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC14.49□□□□□ -0.09
Pde6dO55057 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pde6dO55057 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pde6dO55057 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pde6dO55057 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Pde6dO55057 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Pde6dO55057 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pde6dO55057 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pde6dO55057 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pde6dO55057 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Pde6dO55057 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC14.48□□□□□ -0.09
Pde6dO55057 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pde6dO55057 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Pde6dO55057 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Pde6dO55057 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC14.48□□□□□ -0.09
Pde6dO55057 Gm10232-201ENSMUST00000089221 720 ntBASIC14.48□□□□□ -0.09
Pde6dO55057 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pde6dO55057 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pde6dO55057 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Pde6dO55057 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Pde6dO55057 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pde6dO55057 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Pde6dO55057 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pde6dO55057 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pde6dO55057 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Pde6dO55057 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pde6dO55057 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Pde6dO55057 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC14.47□□□□□ -0.09
Pde6dO55057 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pde6dO55057 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC14.47□□□□□ -0.09
Pde6dO55057 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Pde6dO55057 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Pde6dO55057 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Pde6dO55057 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Pde6dO55057 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC14.47□□□□□ -0.09
Pde6dO55057 Serp2-204ENSMUST00000228055 705 ntBASIC14.47□□□□□ -0.09
Pde6dO55057 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pde6dO55057 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Pde6dO55057 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC14.47□□□□□ -0.09
Pde6dO55057 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pde6dO55057 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pde6dO55057 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pde6dO55057 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pde6dO55057 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pde6dO55057 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC14.47□□□□□ -0.09
Pde6dO55057 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC14.46□□□□□ -0.09
Pde6dO55057 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Pde6dO55057 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pde6dO55057 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pde6dO55057 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pde6dO55057 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
Pde6dO55057 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pde6dO55057 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Pde6dO55057 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pde6dO55057 Zcchc6-207ENSMUST00000225576 2499 ntBASIC14.46□□□□□ -0.09
Pde6dO55057 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC14.46□□□□□ -0.09
Pde6dO55057 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pde6dO55057 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pde6dO55057 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pde6dO55057 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pde6dO55057 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Pde6dO55057 Gm45244-201ENSMUST00000211328 2200 ntBASIC14.46□□□□□ -0.1
Pde6dO55057 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Pde6dO55057 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
Pde6dO55057 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pde6dO55057 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Pde6dO55057 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pde6dO55057 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pde6dO55057 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pde6dO55057 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pde6dO55057 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pde6dO55057 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Pde6dO55057 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pde6dO55057 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pde6dO55057 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pde6dO55057 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pde6dO55057 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Pde6dO55057 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pde6dO55057 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Pde6dO55057 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pde6dO55057 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pde6dO55057 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Pde6dO55057 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Pde6dO55057 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pde6dO55057 Gm43566-201ENSMUST00000196851 808 ntBASIC14.44□□□□□ -0.1
Pde6dO55057 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pde6dO55057 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pde6dO55057 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Pde6dO55057 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pde6dO55057 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pde6dO55057 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Pde6dO55057 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms