Protein–RNA interactions for Protein: O54941

Smarce1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, mousemouse

Known RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarce1O54941 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC21.83■■□□□ 1.09
Smarce1O54941 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Smarce1O54941 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
Smarce1O54941 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Smarce1O54941 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
Smarce1O54941 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Smarce1O54941 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC21.83■■□□□ 1.09
Smarce1O54941 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
Smarce1O54941 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC21.83■■□□□ 1.09
Smarce1O54941 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Smarce1O54941 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Smarce1O54941 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.08
Smarce1O54941 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Smarce1O54941 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Smarce1O54941 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Smarce1O54941 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC21.82■■□□□ 1.08
Smarce1O54941 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC21.82■■□□□ 1.08
Smarce1O54941 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Smarce1O54941 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC21.82■■□□□ 1.08
Smarce1O54941 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Smarce1O54941 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC21.82■■□□□ 1.08
Smarce1O54941 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
Smarce1O54941 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Smarce1O54941 Gm37805-201ENSMUST00000192612 1094 ntBASIC21.81■■□□□ 1.08
Smarce1O54941 CT010467.1-202ENSMUST00000205406 714 ntBASIC21.81■■□□□ 1.08
Smarce1O54941 Gm44832-201ENSMUST00000208849 2303 ntBASIC21.81■■□□□ 1.08
Smarce1O54941 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC21.81■■□□□ 1.08
Smarce1O54941 Gm10167-201ENSMUST00000150411 1479 ntBASIC21.81■■□□□ 1.08
Smarce1O54941 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Smarce1O54941 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Smarce1O54941 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Smarce1O54941 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC21.81■■□□□ 1.08
Smarce1O54941 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
Smarce1O54941 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Smarce1O54941 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Smarce1O54941 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Smarce1O54941 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Smarce1O54941 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Smarce1O54941 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC21.8■■□□□ 1.08
Smarce1O54941 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
Smarce1O54941 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Smarce1O54941 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Smarce1O54941 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Smarce1O54941 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
Smarce1O54941 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Smarce1O54941 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Smarce1O54941 Dmtn-207ENSMUST00000228001 2437 ntBASIC21.79■■□□□ 1.08
Smarce1O54941 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Smarce1O54941 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Smarce1O54941 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Smarce1O54941 Gm26971-201ENSMUST00000182423 1072 ntBASIC21.79■■□□□ 1.08
Smarce1O54941 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC21.79■■□□□ 1.08
Smarce1O54941 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Smarce1O54941 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC21.79■■□□□ 1.08
Smarce1O54941 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Smarce1O54941 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Smarce1O54941 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Smarce1O54941 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
Smarce1O54941 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Smarce1O54941 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC21.79■■□□□ 1.08
Smarce1O54941 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Smarce1O54941 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Smarce1O54941 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Smarce1O54941 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Smarce1O54941 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Smarce1O54941 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
Smarce1O54941 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC21.78■■□□□ 1.08
Smarce1O54941 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Smarce1O54941 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Smarce1O54941 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Smarce1O54941 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
Smarce1O54941 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Smarce1O54941 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.07
Smarce1O54941 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
Smarce1O54941 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Smarce1O54941 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC21.76■■□□□ 1.07
Smarce1O54941 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Smarce1O54941 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC21.76■■□□□ 1.07
Smarce1O54941 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC21.76■■□□□ 1.07
Smarce1O54941 AC107452.1-201ENSMUST00000227963 481 ntBASIC21.76■■□□□ 1.07
Smarce1O54941 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC21.76■■□□□ 1.07
Smarce1O54941 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Smarce1O54941 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Smarce1O54941 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Smarce1O54941 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Smarce1O54941 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Smarce1O54941 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Smarce1O54941 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Smarce1O54941 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
Smarce1O54941 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC21.76■■□□□ 1.07
Smarce1O54941 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Smarce1O54941 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Smarce1O54941 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Smarce1O54941 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Smarce1O54941 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Smarce1O54941 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC21.75■■□□□ 1.07
Smarce1O54941 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
Smarce1O54941 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC21.75■■□□□ 1.07
Smarce1O54941 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Smarce1O54941 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC21.75■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms