Protein–RNA interactions for Protein: O54890

Itgb3, Integrin beta-3, mousemouse

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Itgb3O54890 Gm38342-201ENSMUST00000195710 2980 ntBASIC19.44■□□□□ 0.7
Itgb3O54890 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC19.44■□□□□ 0.7
Itgb3O54890 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Itgb3O54890 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Itgb3O54890 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC19.43■□□□□ 0.7
Itgb3O54890 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Itgb3O54890 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Itgb3O54890 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Itgb3O54890 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Itgb3O54890 Gm15847-201ENSMUST00000121417 1065 ntBASIC19.43■□□□□ 0.7
Itgb3O54890 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC19.43■□□□□ 0.7
Itgb3O54890 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC19.43■□□□□ 0.7
Itgb3O54890 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Itgb3O54890 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Itgb3O54890 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC19.43■□□□□ 0.7
Itgb3O54890 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Itgb3O54890 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Itgb3O54890 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Itgb3O54890 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Itgb3O54890 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Itgb3O54890 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Itgb3O54890 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Itgb3O54890 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Itgb3O54890 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC19.42■□□□□ 0.7
Itgb3O54890 Gm11249-201ENSMUST00000117071 859 ntBASIC19.42■□□□□ 0.7
Itgb3O54890 Gm13168-201ENSMUST00000121771 632 ntBASIC19.42■□□□□ 0.7
Itgb3O54890 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Itgb3O54890 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC19.42■□□□□ 0.7
Itgb3O54890 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Itgb3O54890 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Itgb3O54890 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Itgb3O54890 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Itgb3O54890 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Itgb3O54890 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Itgb3O54890 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Itgb3O54890 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Itgb3O54890 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC19.41■□□□□ 0.7
Itgb3O54890 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Itgb3O54890 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Itgb3O54890 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Itgb3O54890 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Itgb3O54890 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC19.41■□□□□ 0.7
Itgb3O54890 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Itgb3O54890 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC19.41■□□□□ 0.7
Itgb3O54890 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Itgb3O54890 Gm8520-201ENSMUST00000186517 868 ntBASIC19.41■□□□□ 0.7
Itgb3O54890 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Itgb3O54890 Gm7856-201ENSMUST00000117514 1493 ntBASIC19.41■□□□□ 0.7
Itgb3O54890 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Itgb3O54890 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Itgb3O54890 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Itgb3O54890 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Itgb3O54890 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Itgb3O54890 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Itgb3O54890 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Itgb3O54890 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Itgb3O54890 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC19.4■□□□□ 0.7
Itgb3O54890 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Itgb3O54890 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC19.4■□□□□ 0.7
Itgb3O54890 Wnt10b-205ENSMUST00000226846 1204 ntBASIC19.4■□□□□ 0.7
Itgb3O54890 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Itgb3O54890 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Itgb3O54890 Gm21596-201ENSMUST00000178049 1316 ntBASIC19.4■□□□□ 0.7
Itgb3O54890 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Itgb3O54890 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Itgb3O54890 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Itgb3O54890 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Itgb3O54890 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Itgb3O54890 Gm43231-201ENSMUST00000202960 2258 ntBASIC19.4■□□□□ 0.7
Itgb3O54890 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Itgb3O54890 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Itgb3O54890 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Itgb3O54890 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Itgb3O54890 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Itgb3O54890 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Itgb3O54890 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Itgb3O54890 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Itgb3O54890 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Itgb3O54890 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Itgb3O54890 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Itgb3O54890 Gm22240-201ENSMUST00000175225 82 ntBASIC19.39■□□□□ 0.69
Itgb3O54890 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC19.39■□□□□ 0.69
Itgb3O54890 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Itgb3O54890 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC19.39■□□□□ 0.69
Itgb3O54890 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Itgb3O54890 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Itgb3O54890 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Itgb3O54890 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Itgb3O54890 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Itgb3O54890 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Itgb3O54890 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Itgb3O54890 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Itgb3O54890 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Itgb3O54890 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Itgb3O54890 Flg-201ENSMUST00000050758 1488 ntBASIC19.38■□□□□ 0.69
Itgb3O54890 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Itgb3O54890 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Itgb3O54890 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Itgb3O54890 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC19.37■□□□□ 0.69
Itgb3O54890 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms