Protein–RNA interactions for Protein: O35914

Bnc1, Zinc finger protein basonuclin-1, mousemouse

Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Bnc1O35914 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC18.52■□□□□ 0.55
Bnc1O35914 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Bnc1O35914 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Bnc1O35914 Gm21596-201ENSMUST00000178049 1316 ntBASIC18.51■□□□□ 0.55
Bnc1O35914 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Bnc1O35914 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Bnc1O35914 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Bnc1O35914 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Bnc1O35914 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Bnc1O35914 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Bnc1O35914 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC18.51■□□□□ 0.55
Bnc1O35914 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC18.51■□□□□ 0.55
Bnc1O35914 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Bnc1O35914 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC18.5■□□□□ 0.55
Bnc1O35914 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Bnc1O35914 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Bnc1O35914 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Bnc1O35914 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Bnc1O35914 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC18.5■□□□□ 0.55
Bnc1O35914 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Bnc1O35914 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC18.5■□□□□ 0.55
Bnc1O35914 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Bnc1O35914 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Bnc1O35914 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC18.5■□□□□ 0.55
Bnc1O35914 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Bnc1O35914 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Bnc1O35914 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Bnc1O35914 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Bnc1O35914 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Bnc1O35914 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Bnc1O35914 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC18.49■□□□□ 0.55
Bnc1O35914 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Bnc1O35914 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Bnc1O35914 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Bnc1O35914 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Bnc1O35914 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC18.49■□□□□ 0.55
Bnc1O35914 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Bnc1O35914 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Bnc1O35914 AC135963.1-201ENSMUST00000211640 717 ntBASIC18.49■□□□□ 0.55
Bnc1O35914 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Bnc1O35914 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Bnc1O35914 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Bnc1O35914 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Bnc1O35914 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Bnc1O35914 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Bnc1O35914 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Bnc1O35914 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Bnc1O35914 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Bnc1O35914 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Bnc1O35914 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Bnc1O35914 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC18.48■□□□□ 0.55
Bnc1O35914 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Bnc1O35914 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Bnc1O35914 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Bnc1O35914 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC18.48■□□□□ 0.55
Bnc1O35914 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Bnc1O35914 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Bnc1O35914 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC18.48■□□□□ 0.55
Bnc1O35914 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC18.48■□□□□ 0.55
Bnc1O35914 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC18.48■□□□□ 0.55
Bnc1O35914 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Bnc1O35914 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Bnc1O35914 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Bnc1O35914 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Bnc1O35914 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Bnc1O35914 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Bnc1O35914 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Bnc1O35914 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Bnc1O35914 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Bnc1O35914 Gm715-201ENSMUST00000117865 831 ntBASIC18.47■□□□□ 0.55
Bnc1O35914 Gm26971-201ENSMUST00000182423 1072 ntBASIC18.47■□□□□ 0.55
Bnc1O35914 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC18.47■□□□□ 0.55
Bnc1O35914 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC18.47■□□□□ 0.55
Bnc1O35914 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Bnc1O35914 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Bnc1O35914 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC18.47■□□□□ 0.55
Bnc1O35914 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Bnc1O35914 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Bnc1O35914 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Bnc1O35914 AC122335.2-201ENSMUST00000213901 6181 ntBASIC18.46■□□□□ 0.55
Bnc1O35914 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Bnc1O35914 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Bnc1O35914 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Bnc1O35914 Gm11249-201ENSMUST00000117071 859 ntBASIC18.46■□□□□ 0.55
Bnc1O35914 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Bnc1O35914 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Bnc1O35914 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Bnc1O35914 Golph3-205ENSMUST00000228671 2842 ntBASIC18.46■□□□□ 0.55
Bnc1O35914 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Bnc1O35914 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Bnc1O35914 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Bnc1O35914 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Bnc1O35914 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Bnc1O35914 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Bnc1O35914 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Bnc1O35914 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Bnc1O35914 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Bnc1O35914 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC18.45■□□□□ 0.54
Bnc1O35914 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC18.45■□□□□ 0.54
Bnc1O35914 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms