Protein–RNA interactions for Protein: O35600

Abca4, Retinal-specific ATP-binding cassette transporter, mousemouse

Predictions only

Length 2,310 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca4O35600 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Abca4O35600 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Abca4O35600 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Abca4O35600 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Abca4O35600 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC17.29■□□□□ 0.36
Abca4O35600 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Abca4O35600 Gm37035-201ENSMUST00000194809 2148 ntBASIC17.29■□□□□ 0.36
Abca4O35600 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Abca4O35600 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Abca4O35600 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Abca4O35600 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Abca4O35600 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Abca4O35600 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Abca4O35600 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Abca4O35600 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Abca4O35600 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Abca4O35600 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
Abca4O35600 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Abca4O35600 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC17.29■□□□□ 0.36
Abca4O35600 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Abca4O35600 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Abca4O35600 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Abca4O35600 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC17.28■□□□□ 0.36
Abca4O35600 Gm4217-201ENSMUST00000182243 1002 ntBASIC17.28■□□□□ 0.36
Abca4O35600 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Abca4O35600 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
Abca4O35600 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Abca4O35600 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Abca4O35600 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Abca4O35600 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC17.28■□□□□ 0.36
Abca4O35600 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Abca4O35600 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Abca4O35600 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Abca4O35600 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Abca4O35600 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Abca4O35600 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Abca4O35600 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Abca4O35600 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Abca4O35600 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.35
Abca4O35600 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Abca4O35600 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC17.27■□□□□ 0.35
Abca4O35600 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC17.27■□□□□ 0.35
Abca4O35600 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Abca4O35600 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Abca4O35600 Gm10654-201ENSMUST00000098653 1633 ntBASIC17.27■□□□□ 0.35
Abca4O35600 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Abca4O35600 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Abca4O35600 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Abca4O35600 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Abca4O35600 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC17.26■□□□□ 0.35
Abca4O35600 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Abca4O35600 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Abca4O35600 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC17.26■□□□□ 0.35
Abca4O35600 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Abca4O35600 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Abca4O35600 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Abca4O35600 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Abca4O35600 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC17.25■□□□□ 0.35
Abca4O35600 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Abca4O35600 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Abca4O35600 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Abca4O35600 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Abca4O35600 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Abca4O35600 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Abca4O35600 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Abca4O35600 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Abca4O35600 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Abca4O35600 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Abca4O35600 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Abca4O35600 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Abca4O35600 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Abca4O35600 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Abca4O35600 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Abca4O35600 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Abca4O35600 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Abca4O35600 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Abca4O35600 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Abca4O35600 Olfr129-201ENSMUST00000122318 993 ntBASIC17.24■□□□□ 0.35
Abca4O35600 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Abca4O35600 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Abca4O35600 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Abca4O35600 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Abca4O35600 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Abca4O35600 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
Abca4O35600 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Abca4O35600 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC17.24■□□□□ 0.35
Abca4O35600 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Abca4O35600 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Abca4O35600 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Abca4O35600 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Abca4O35600 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Abca4O35600 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Abca4O35600 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Abca4O35600 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Abca4O35600 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Abca4O35600 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Abca4O35600 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC17.23■□□□□ 0.35
Abca4O35600 Mir1668-201ENSMUST00000184114 107 ntBASIC17.23■□□□□ 0.35
Abca4O35600 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Abca4O35600 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC17.23■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms