Protein–RNA interactions for Protein: O35526

Stx1a, Syntaxin-1A, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stx1aO35526 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC20.61■□□□□ 0.89
Stx1aO35526 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Stx1aO35526 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Stx1aO35526 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Stx1aO35526 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Stx1aO35526 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Stx1aO35526 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Stx1aO35526 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Stx1aO35526 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Stx1aO35526 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Stx1aO35526 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Stx1aO35526 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Stx1aO35526 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Stx1aO35526 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC20.6■□□□□ 0.89
Stx1aO35526 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Stx1aO35526 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Stx1aO35526 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Stx1aO35526 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Stx1aO35526 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Stx1aO35526 Gm38205-201ENSMUST00000192243 258 ntBASIC20.6■□□□□ 0.89
Stx1aO35526 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Stx1aO35526 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
Stx1aO35526 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Stx1aO35526 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Stx1aO35526 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC20.6■□□□□ 0.89
Stx1aO35526 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Stx1aO35526 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Stx1aO35526 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Stx1aO35526 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Stx1aO35526 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Stx1aO35526 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Stx1aO35526 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Stx1aO35526 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Stx1aO35526 Gm10167-201ENSMUST00000150411 1479 ntBASIC20.59■□□□□ 0.89
Stx1aO35526 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Stx1aO35526 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC20.59■□□□□ 0.89
Stx1aO35526 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC20.59■□□□□ 0.89
Stx1aO35526 Gm8493-201ENSMUST00000196881 489 ntBASIC20.59■□□□□ 0.89
Stx1aO35526 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Stx1aO35526 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Stx1aO35526 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
Stx1aO35526 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Stx1aO35526 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Stx1aO35526 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Stx1aO35526 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Stx1aO35526 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Stx1aO35526 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Stx1aO35526 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Stx1aO35526 Fcho2-208ENSMUST00000224992 2964 ntBASIC20.58■□□□□ 0.89
Stx1aO35526 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Stx1aO35526 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Stx1aO35526 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Stx1aO35526 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Stx1aO35526 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Stx1aO35526 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Stx1aO35526 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
Stx1aO35526 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Stx1aO35526 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC20.58■□□□□ 0.89
Stx1aO35526 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC20.58■□□□□ 0.89
Stx1aO35526 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Stx1aO35526 AC121961.1-201ENSMUST00000218594 1779 ntBASIC20.58■□□□□ 0.89
Stx1aO35526 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Stx1aO35526 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Stx1aO35526 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC20.58■□□□□ 0.88
Stx1aO35526 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Stx1aO35526 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Stx1aO35526 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Stx1aO35526 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
Stx1aO35526 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC20.57■□□□□ 0.88
Stx1aO35526 Gm21956-201ENSMUST00000179946 522 ntBASIC20.57■□□□□ 0.88
Stx1aO35526 AC107452.1-201ENSMUST00000227963 481 ntBASIC20.57■□□□□ 0.88
Stx1aO35526 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Stx1aO35526 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Stx1aO35526 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Stx1aO35526 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Stx1aO35526 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Stx1aO35526 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC20.57■□□□□ 0.88
Stx1aO35526 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Stx1aO35526 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC20.57■□□□□ 0.88
Stx1aO35526 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Stx1aO35526 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Stx1aO35526 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Stx1aO35526 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Stx1aO35526 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Stx1aO35526 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Stx1aO35526 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Stx1aO35526 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Stx1aO35526 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Stx1aO35526 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
Stx1aO35526 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Stx1aO35526 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC20.56■□□□□ 0.88
Stx1aO35526 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Stx1aO35526 Zcchc6-207ENSMUST00000225576 2499 ntBASIC20.56■□□□□ 0.88
Stx1aO35526 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC20.56■□□□□ 0.88
Stx1aO35526 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Stx1aO35526 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Stx1aO35526 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Stx1aO35526 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Stx1aO35526 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC20.55■□□□□ 0.88
Stx1aO35526 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms