Protein–RNA interactions for Protein: O35454

Clcn6, Chloride transport protein 6, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn6O35454 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
Clcn6O35454 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Clcn6O35454 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
Clcn6O35454 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC19.33■□□□□ 0.68
Clcn6O35454 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Clcn6O35454 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC19.33■□□□□ 0.68
Clcn6O35454 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
Clcn6O35454 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC19.33■□□□□ 0.68
Clcn6O35454 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Clcn6O35454 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Clcn6O35454 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Clcn6O35454 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Clcn6O35454 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Clcn6O35454 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Clcn6O35454 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC19.32■□□□□ 0.68
Clcn6O35454 Gm44840-201ENSMUST00000208983 1168 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Clcn6O35454 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Clcn6O35454 AC123834.2-201ENSMUST00000224038 2340 ntBASIC19.32■□□□□ 0.68
Clcn6O35454 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Clcn6O35454 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Clcn6O35454 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Clcn6O35454 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Clcn6O35454 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Clcn6O35454 Gm15853-202ENSMUST00000195518 2041 ntBASIC19.32■□□□□ 0.68
Clcn6O35454 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Clcn6O35454 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Clcn6O35454 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Clcn6O35454 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Clcn6O35454 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Clcn6O35454 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Clcn6O35454 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Clcn6O35454 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Clcn6O35454 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Clcn6O35454 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Clcn6O35454 Gm5797-201ENSMUST00000100886 997 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Clcn6O35454 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC19.31■□□□□ 0.68
Clcn6O35454 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Clcn6O35454 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Clcn6O35454 Gm3149-201ENSMUST00000112779 997 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Clcn6O35454 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Clcn6O35454 Gm8362-202ENSMUST00000170673 997 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Clcn6O35454 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Clcn6O35454 Gm31925-201ENSMUST00000193561 600 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Clcn6O35454 Gm2011-201ENSMUST00000203124 1263 ntBASIC19.31■□□□□ 0.68
Clcn6O35454 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC19.31■□□□□ 0.68
Clcn6O35454 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Clcn6O35454 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Clcn6O35454 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Clcn6O35454 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC19.31■□□□□ 0.68
Clcn6O35454 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Clcn6O35454 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Clcn6O35454 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Clcn6O35454 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Clcn6O35454 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Clcn6O35454 5033425B01Rik-201ENSMUST00000213948 1303 ntBASIC19.3■□□□□ 0.68
Clcn6O35454 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC19.3■□□□□ 0.68
Clcn6O35454 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Clcn6O35454 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Clcn6O35454 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
Clcn6O35454 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Clcn6O35454 Gm14740-201ENSMUST00000118538 1150 ntBASIC19.3■□□□□ 0.68
Clcn6O35454 Smad6-203ENSMUST00000179458 273 ntBASIC19.3■□□□□ 0.68
Clcn6O35454 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Clcn6O35454 Gm37866-201ENSMUST00000191950 696 ntBASIC19.3■□□□□ 0.68
Clcn6O35454 Rnf212-202ENSMUST00000196652 853 ntTSL 2 BASIC19.3■□□□□ 0.68
Clcn6O35454 Msmb-201ENSMUST00000022464 562 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Clcn6O35454 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Clcn6O35454 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Clcn6O35454 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Clcn6O35454 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
Clcn6O35454 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Clcn6O35454 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Clcn6O35454 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Clcn6O35454 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Clcn6O35454 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Clcn6O35454 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Clcn6O35454 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Clcn6O35454 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC19.29■□□□□ 0.68
Clcn6O35454 E130114P18Rik-201ENSMUST00000107067 1092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Clcn6O35454 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC19.29■□□□□ 0.68
Clcn6O35454 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
Clcn6O35454 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC19.29■□□□□ 0.68
Clcn6O35454 Rpp30-201ENSMUST00000025714 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Clcn6O35454 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Clcn6O35454 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Clcn6O35454 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC19.29■□□□□ 0.68
Clcn6O35454 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Clcn6O35454 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC19.29■□□□□ 0.68
Clcn6O35454 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Clcn6O35454 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Clcn6O35454 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Clcn6O35454 Gm43066-201ENSMUST00000199589 1260 ntBASIC19.28■□□□□ 0.68
Clcn6O35454 Gm21168-201ENSMUST00000199646 1096 ntBASIC19.28■□□□□ 0.68
Clcn6O35454 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC19.28■□□□□ 0.68
Clcn6O35454 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Clcn6O35454 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Clcn6O35454 Gm10571-201ENSMUST00000097869 1638 ntBASIC19.28■□□□□ 0.68
Clcn6O35454 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC19.28■□□□□ 0.68
Clcn6O35454 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Clcn6O35454 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms