Protein–RNA interactions for Protein: O35350

Capn1, Calpain-1 catalytic subunit, mousemouse

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Capn1O35350 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Capn1O35350 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Capn1O35350 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Capn1O35350 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Capn1O35350 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Capn1O35350 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC16.91■□□□□ 0.3
Capn1O35350 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Capn1O35350 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Capn1O35350 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Capn1O35350 Gm44672-201ENSMUST00000206944 1098 ntBASIC16.91■□□□□ 0.3
Capn1O35350 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC16.91■□□□□ 0.3
Capn1O35350 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
Capn1O35350 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Capn1O35350 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Capn1O35350 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Capn1O35350 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Capn1O35350 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Capn1O35350 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Capn1O35350 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Capn1O35350 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Capn1O35350 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Capn1O35350 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC16.9■□□□□ 0.3
Capn1O35350 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
Capn1O35350 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
Capn1O35350 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Capn1O35350 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Capn1O35350 Gm26971-201ENSMUST00000182423 1072 ntBASIC16.9■□□□□ 0.3
Capn1O35350 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Capn1O35350 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Capn1O35350 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Capn1O35350 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Capn1O35350 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Capn1O35350 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Capn1O35350 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
Capn1O35350 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Capn1O35350 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Capn1O35350 Shroom3-211ENSMUST00000225438 5742 ntBASIC16.89■□□□□ 0.29
Capn1O35350 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Capn1O35350 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
Capn1O35350 Gm5784-201ENSMUST00000179344 2478 ntBASIC16.89■□□□□ 0.29
Capn1O35350 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Capn1O35350 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Capn1O35350 Gm13168-201ENSMUST00000121771 632 ntBASIC16.89■□□□□ 0.29
Capn1O35350 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC16.89■□□□□ 0.29
Capn1O35350 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Capn1O35350 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Capn1O35350 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Capn1O35350 Gm13509-201ENSMUST00000119733 1308 ntBASIC16.89■□□□□ 0.29
Capn1O35350 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Capn1O35350 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC16.89■□□□□ 0.29
Capn1O35350 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Capn1O35350 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Capn1O35350 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Capn1O35350 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Capn1O35350 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Capn1O35350 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Capn1O35350 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Capn1O35350 Gm38342-201ENSMUST00000195710 2980 ntBASIC16.88■□□□□ 0.29
Capn1O35350 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Capn1O35350 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Capn1O35350 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC16.88■□□□□ 0.29
Capn1O35350 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC16.88■□□□□ 0.29
Capn1O35350 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Capn1O35350 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Capn1O35350 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Capn1O35350 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Capn1O35350 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Capn1O35350 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC16.88■□□□□ 0.29
Capn1O35350 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Capn1O35350 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Capn1O35350 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Capn1O35350 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Capn1O35350 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Capn1O35350 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Capn1O35350 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Capn1O35350 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC16.87■□□□□ 0.29
Capn1O35350 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Capn1O35350 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC16.87■□□□□ 0.29
Capn1O35350 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Capn1O35350 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Capn1O35350 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Capn1O35350 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Capn1O35350 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Capn1O35350 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Capn1O35350 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Capn1O35350 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Capn1O35350 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Capn1O35350 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC16.87■□□□□ 0.29
Capn1O35350 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Capn1O35350 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Capn1O35350 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Capn1O35350 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Capn1O35350 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Capn1O35350 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Capn1O35350 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Capn1O35350 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Capn1O35350 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Capn1O35350 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Capn1O35350 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Capn1O35350 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms