Protein–RNA interactions for Protein: O35235

Tnfsf11, Tumor necrosis factor ligand superfamily member 11, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf11O35235 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC14.31□□□□□ -0.12
Tnfsf11O35235 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC14.31□□□□□ -0.12
Tnfsf11O35235 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Tnfsf11O35235 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC14.31□□□□□ -0.12
Tnfsf11O35235 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC14.31□□□□□ -0.12
Tnfsf11O35235 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Tnfsf11O35235 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tnfsf11O35235 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tnfsf11O35235 Gm7292-201ENSMUST00000194706 2527 ntBASIC14.31□□□□□ -0.12
Tnfsf11O35235 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Tnfsf11O35235 Gm45244-201ENSMUST00000211328 2200 ntBASIC14.3□□□□□ -0.12
Tnfsf11O35235 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
Tnfsf11O35235 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Tnfsf11O35235 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Tnfsf11O35235 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Tnfsf11O35235 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Tnfsf11O35235 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Tnfsf11O35235 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC14.3□□□□□ -0.12
Tnfsf11O35235 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Tnfsf11O35235 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC14.3□□□□□ -0.12
Tnfsf11O35235 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC14.3□□□□□ -0.12
Tnfsf11O35235 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC14.3□□□□□ -0.12
Tnfsf11O35235 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Tnfsf11O35235 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Tnfsf11O35235 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Tnfsf11O35235 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC14.3□□□□□ -0.12
Tnfsf11O35235 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Tnfsf11O35235 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Tnfsf11O35235 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Tnfsf11O35235 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Tnfsf11O35235 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC14.3□□□□□ -0.12
Tnfsf11O35235 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Tnfsf11O35235 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tnfsf11O35235 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tnfsf11O35235 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tnfsf11O35235 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tnfsf11O35235 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tnfsf11O35235 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tnfsf11O35235 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Tnfsf11O35235 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tnfsf11O35235 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tnfsf11O35235 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Tnfsf11O35235 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tnfsf11O35235 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Tnfsf11O35235 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Tnfsf11O35235 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
Tnfsf11O35235 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tnfsf11O35235 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tnfsf11O35235 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Tnfsf11O35235 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
Tnfsf11O35235 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Tnfsf11O35235 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Tnfsf11O35235 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tnfsf11O35235 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tnfsf11O35235 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tnfsf11O35235 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tnfsf11O35235 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Tnfsf11O35235 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tnfsf11O35235 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC14.28□□□□□ -0.12
Tnfsf11O35235 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Tnfsf11O35235 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC14.28□□□□□ -0.12
Tnfsf11O35235 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tnfsf11O35235 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tnfsf11O35235 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tnfsf11O35235 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tnfsf11O35235 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Tnfsf11O35235 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tnfsf11O35235 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tnfsf11O35235 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Tnfsf11O35235 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Tnfsf11O35235 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Tnfsf11O35235 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Tnfsf11O35235 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC14.27□□□□□ -0.12
Tnfsf11O35235 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Tnfsf11O35235 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Tnfsf11O35235 Gm10209-201ENSMUST00000203397 1607 ntBASIC14.27□□□□□ -0.12
Tnfsf11O35235 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Tnfsf11O35235 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Tnfsf11O35235 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Tnfsf11O35235 AC093043.1-201ENSMUST00000226700 898 ntBASIC14.27□□□□□ -0.13
Tnfsf11O35235 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Tnfsf11O35235 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Tnfsf11O35235 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Tnfsf11O35235 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Tnfsf11O35235 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.13
Tnfsf11O35235 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC14.27□□□□□ -0.13
Tnfsf11O35235 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC14.27□□□□□ -0.13
Tnfsf11O35235 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Tnfsf11O35235 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.13
Tnfsf11O35235 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Tnfsf11O35235 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Tnfsf11O35235 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Tnfsf11O35235 Gm45906-201ENSMUST00000208911 1430 ntBASIC14.26□□□□□ -0.13
Tnfsf11O35235 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tnfsf11O35235 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tnfsf11O35235 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tnfsf11O35235 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tnfsf11O35235 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tnfsf11O35235 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tnfsf11O35235 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms