Protein–RNA interactions for Protein: O08848

Trove2, 60 kDa SS-A/Ro ribonucleoprotein, mousemouse

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trove2O08848 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trove2O08848 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trove2O08848 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trove2O08848 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trove2O08848 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trove2O08848 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trove2O08848 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
Trove2O08848 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Trove2O08848 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Trove2O08848 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trove2O08848 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trove2O08848 Gm45417-201ENSMUST00000209533 758 ntBASIC18.78■□□□□ 0.6
Trove2O08848 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trove2O08848 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trove2O08848 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trove2O08848 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trove2O08848 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trove2O08848 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trove2O08848 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trove2O08848 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Trove2O08848 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trove2O08848 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trove2O08848 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Trove2O08848 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Trove2O08848 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Trove2O08848 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC18.77■□□□□ 0.6
Trove2O08848 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC18.77■□□□□ 0.6
Trove2O08848 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Trove2O08848 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC18.77■□□□□ 0.59
Trove2O08848 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Trove2O08848 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Trove2O08848 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trove2O08848 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trove2O08848 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trove2O08848 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trove2O08848 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trove2O08848 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trove2O08848 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trove2O08848 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trove2O08848 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trove2O08848 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trove2O08848 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Trove2O08848 Gm7856-201ENSMUST00000117514 1493 ntBASIC18.76■□□□□ 0.59
Trove2O08848 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC18.76■□□□□ 0.59
Trove2O08848 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Trove2O08848 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trove2O08848 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trove2O08848 AC165080.2-201ENSMUST00000217491 1530 ntBASIC18.75■□□□□ 0.59
Trove2O08848 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trove2O08848 Gm5421-201ENSMUST00000181698 2354 ntBASIC18.75■□□□□ 0.59
Trove2O08848 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Trove2O08848 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trove2O08848 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Trove2O08848 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC18.75■□□□□ 0.59
Trove2O08848 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Trove2O08848 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC18.75■□□□□ 0.59
Trove2O08848 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trove2O08848 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Trove2O08848 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trove2O08848 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Trove2O08848 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC18.74■□□□□ 0.59
Trove2O08848 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC18.74■□□□□ 0.59
Trove2O08848 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Trove2O08848 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Trove2O08848 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trove2O08848 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Trove2O08848 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
Trove2O08848 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trove2O08848 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC18.74■□□□□ 0.59
Trove2O08848 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC18.74■□□□□ 0.59
Trove2O08848 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trove2O08848 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trove2O08848 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trove2O08848 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trove2O08848 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trove2O08848 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trove2O08848 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trove2O08848 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trove2O08848 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Trove2O08848 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trove2O08848 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC18.73■□□□□ 0.59
Trove2O08848 Gm43173-201ENSMUST00000202246 593 ntBASIC18.73■□□□□ 0.59
Trove2O08848 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trove2O08848 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trove2O08848 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC18.73■□□□□ 0.59
Trove2O08848 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trove2O08848 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC18.73■□□□□ 0.59
Trove2O08848 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trove2O08848 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trove2O08848 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
Trove2O08848 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trove2O08848 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trove2O08848 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trove2O08848 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trove2O08848 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trove2O08848 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Trove2O08848 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trove2O08848 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Trove2O08848 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC18.72■□□□□ 0.59
Trove2O08848 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 92.1 ms