Protein–RNA interactions for Protein: O08811

Ercc2, General transcription and DNA repair factor IIH helicase subunit XPD, mousemouse

Known RBP Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc2O08811 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ercc2O08811 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ercc2O08811 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ercc2O08811 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Ercc2O08811 Gm9194-201ENSMUST00000220749 1447 ntBASIC18.75■□□□□ 0.59
Ercc2O08811 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ercc2O08811 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Ercc2O08811 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ercc2O08811 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
Ercc2O08811 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC18.75■□□□□ 0.59
Ercc2O08811 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ercc2O08811 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ercc2O08811 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ercc2O08811 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ercc2O08811 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ercc2O08811 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ercc2O08811 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ercc2O08811 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
Ercc2O08811 Gm22325-201ENSMUST00000158904 308 ntBASIC18.74■□□□□ 0.59
Ercc2O08811 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ercc2O08811 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Ercc2O08811 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Ercc2O08811 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC18.74■□□□□ 0.59
Ercc2O08811 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ercc2O08811 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Ercc2O08811 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ercc2O08811 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ercc2O08811 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Ercc2O08811 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC18.73■□□□□ 0.59
Ercc2O08811 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Ercc2O08811 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC18.73■□□□□ 0.59
Ercc2O08811 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Ercc2O08811 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Ercc2O08811 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ercc2O08811 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Ercc2O08811 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ercc2O08811 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ercc2O08811 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC18.73■□□□□ 0.59
Ercc2O08811 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Ercc2O08811 Gm38308-201ENSMUST00000194934 1809 ntBASIC18.72■□□□□ 0.59
Ercc2O08811 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ercc2O08811 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ercc2O08811 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ercc2O08811 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Ercc2O08811 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
Ercc2O08811 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ercc2O08811 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Ercc2O08811 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ercc2O08811 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Ercc2O08811 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ercc2O08811 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ercc2O08811 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ercc2O08811 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Ercc2O08811 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Ercc2O08811 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC18.71■□□□□ 0.59
Ercc2O08811 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
Ercc2O08811 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ercc2O08811 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC18.71■□□□□ 0.59
Ercc2O08811 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Ercc2O08811 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ercc2O08811 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Ercc2O08811 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ercc2O08811 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ercc2O08811 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ercc2O08811 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Ercc2O08811 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ercc2O08811 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ercc2O08811 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ercc2O08811 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Ercc2O08811 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC18.71■□□□□ 0.58
Ercc2O08811 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC18.71■□□□□ 0.58
Ercc2O08811 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ercc2O08811 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ercc2O08811 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ercc2O08811 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
Ercc2O08811 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ercc2O08811 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Ercc2O08811 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ercc2O08811 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Ercc2O08811 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Ercc2O08811 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Ercc2O08811 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ercc2O08811 Gm10602-201ENSMUST00000098239 609 ntBASIC18.7■□□□□ 0.58
Ercc2O08811 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ercc2O08811 AC121961.1-201ENSMUST00000218594 1779 ntBASIC18.7■□□□□ 0.58
Ercc2O08811 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ercc2O08811 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Ercc2O08811 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ercc2O08811 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ercc2O08811 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ercc2O08811 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ercc2O08811 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
Ercc2O08811 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Ercc2O08811 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ercc2O08811 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ercc2O08811 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC18.69■□□□□ 0.58
Ercc2O08811 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Ercc2O08811 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ercc2O08811 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Ercc2O08811 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms