Protein–RNA interactions for Protein: M0QWN7

Usp35, Ubiquitin-specific peptidase 35, mousemouse

Predictions only

Length 1,009 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp35M0QWN7 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Usp35M0QWN7 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Usp35M0QWN7 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC19.6■□□□□ 0.73
Usp35M0QWN7 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Usp35M0QWN7 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Usp35M0QWN7 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC19.6■□□□□ 0.73
Usp35M0QWN7 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Usp35M0QWN7 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Usp35M0QWN7 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Usp35M0QWN7 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Usp35M0QWN7 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Usp35M0QWN7 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Usp35M0QWN7 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Usp35M0QWN7 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Usp35M0QWN7 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Usp35M0QWN7 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Usp35M0QWN7 Gm32699-201ENSMUST00000221728 1988 ntBASIC19.59■□□□□ 0.73
Usp35M0QWN7 Rncr4-201ENSMUST00000194541 2234 ntBASIC19.59■□□□□ 0.73
Usp35M0QWN7 Gm13509-201ENSMUST00000119733 1308 ntBASIC19.58■□□□□ 0.73
Usp35M0QWN7 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC19.58■□□□□ 0.73
Usp35M0QWN7 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Usp35M0QWN7 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC19.58■□□□□ 0.72
Usp35M0QWN7 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC19.58■□□□□ 0.72
Usp35M0QWN7 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Usp35M0QWN7 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Usp35M0QWN7 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Usp35M0QWN7 Trmt13-210ENSMUST00000198454 880 ntBASIC19.58■□□□□ 0.72
Usp35M0QWN7 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Usp35M0QWN7 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC19.58■□□□□ 0.72
Usp35M0QWN7 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Usp35M0QWN7 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Usp35M0QWN7 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
Usp35M0QWN7 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
Usp35M0QWN7 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Usp35M0QWN7 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
Usp35M0QWN7 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Usp35M0QWN7 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Usp35M0QWN7 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Usp35M0QWN7 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Usp35M0QWN7 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Usp35M0QWN7 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Usp35M0QWN7 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Usp35M0QWN7 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Usp35M0QWN7 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC19.57■□□□□ 0.72
Usp35M0QWN7 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Usp35M0QWN7 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Usp35M0QWN7 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC19.57■□□□□ 0.72
Usp35M0QWN7 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Usp35M0QWN7 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
Usp35M0QWN7 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Usp35M0QWN7 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Usp35M0QWN7 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Usp35M0QWN7 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC19.57■□□□□ 0.72
Usp35M0QWN7 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Usp35M0QWN7 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Usp35M0QWN7 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Usp35M0QWN7 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Usp35M0QWN7 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Usp35M0QWN7 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Usp35M0QWN7 Fam105a-203ENSMUST00000226170 3043 ntBASIC19.56■□□□□ 0.72
Usp35M0QWN7 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC19.56■□□□□ 0.72
Usp35M0QWN7 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Usp35M0QWN7 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Usp35M0QWN7 Gm44878-201ENSMUST00000205812 1295 ntBASIC19.56■□□□□ 0.72
Usp35M0QWN7 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Usp35M0QWN7 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Usp35M0QWN7 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Usp35M0QWN7 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Usp35M0QWN7 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Usp35M0QWN7 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC19.56■□□□□ 0.72
Usp35M0QWN7 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Usp35M0QWN7 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC19.56■□□□□ 0.72
Usp35M0QWN7 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Usp35M0QWN7 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Usp35M0QWN7 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Usp35M0QWN7 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Usp35M0QWN7 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Usp35M0QWN7 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Usp35M0QWN7 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Usp35M0QWN7 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Usp35M0QWN7 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC19.55■□□□□ 0.72
Usp35M0QWN7 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC19.55■□□□□ 0.72
Usp35M0QWN7 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Usp35M0QWN7 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Usp35M0QWN7 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Usp35M0QWN7 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Usp35M0QWN7 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
Usp35M0QWN7 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC19.55■□□□□ 0.72
Usp35M0QWN7 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Usp35M0QWN7 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Usp35M0QWN7 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC19.54■□□□□ 0.72
Usp35M0QWN7 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Usp35M0QWN7 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Usp35M0QWN7 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Usp35M0QWN7 Gm22325-201ENSMUST00000158904 308 ntBASIC19.54■□□□□ 0.72
Usp35M0QWN7 Mir7071-201ENSMUST00000184847 69 ntBASIC19.54■□□□□ 0.72
Usp35M0QWN7 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Usp35M0QWN7 Gm38342-201ENSMUST00000195710 2980 ntBASIC19.54■□□□□ 0.72
Usp35M0QWN7 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Usp35M0QWN7 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms