Protein–RNA interactions for Protein: G3X8Y1

Trim55, MCG19772, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim55G3X8Y1 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC18.82■□□□□ 0.6
Trim55G3X8Y1 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim55G3X8Y1 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Trim55G3X8Y1 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim55G3X8Y1 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim55G3X8Y1 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
Trim55G3X8Y1 Fcho2-208ENSMUST00000224992 2964 ntBASIC18.82■□□□□ 0.6
Trim55G3X8Y1 Gm43294-201ENSMUST00000202850 2490 ntBASIC18.82■□□□□ 0.6
Trim55G3X8Y1 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Trim55G3X8Y1 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Trim55G3X8Y1 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim55G3X8Y1 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Trim55G3X8Y1 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim55G3X8Y1 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim55G3X8Y1 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Trim55G3X8Y1 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
Trim55G3X8Y1 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim55G3X8Y1 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Trim55G3X8Y1 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim55G3X8Y1 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim55G3X8Y1 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim55G3X8Y1 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim55G3X8Y1 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim55G3X8Y1 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim55G3X8Y1 Gm5522-201ENSMUST00000189483 1242 ntBASIC18.81■□□□□ 0.6
Trim55G3X8Y1 Gm45640-201ENSMUST00000210665 1896 ntBASIC18.81■□□□□ 0.6
Trim55G3X8Y1 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Trim55G3X8Y1 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim55G3X8Y1 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC18.81■□□□□ 0.6
Trim55G3X8Y1 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim55G3X8Y1 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim55G3X8Y1 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim55G3X8Y1 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim55G3X8Y1 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim55G3X8Y1 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Trim55G3X8Y1 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim55G3X8Y1 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Trim55G3X8Y1 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim55G3X8Y1 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Trim55G3X8Y1 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim55G3X8Y1 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim55G3X8Y1 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Trim55G3X8Y1 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
Trim55G3X8Y1 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim55G3X8Y1 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Trim55G3X8Y1 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim55G3X8Y1 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim55G3X8Y1 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim55G3X8Y1 CT010478.1-201ENSMUST00000220747 2787 ntBASIC18.8■□□□□ 0.6
Trim55G3X8Y1 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Trim55G3X8Y1 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim55G3X8Y1 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim55G3X8Y1 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Trim55G3X8Y1 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim55G3X8Y1 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC18.79■□□□□ 0.6
Trim55G3X8Y1 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim55G3X8Y1 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim55G3X8Y1 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim55G3X8Y1 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Trim55G3X8Y1 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC18.79■□□□□ 0.6
Trim55G3X8Y1 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Trim55G3X8Y1 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim55G3X8Y1 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim55G3X8Y1 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim55G3X8Y1 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim55G3X8Y1 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Trim55G3X8Y1 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Trim55G3X8Y1 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Trim55G3X8Y1 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim55G3X8Y1 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC18.78■□□□□ 0.6
Trim55G3X8Y1 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim55G3X8Y1 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim55G3X8Y1 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC18.78■□□□□ 0.6
Trim55G3X8Y1 Nsd1-203ENSMUST00000224156 1149 ntBASIC18.78■□□□□ 0.6
Trim55G3X8Y1 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim55G3X8Y1 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim55G3X8Y1 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trim55G3X8Y1 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
Trim55G3X8Y1 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trim55G3X8Y1 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trim55G3X8Y1 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC18.77■□□□□ 0.6
Trim55G3X8Y1 Gm28265-201ENSMUST00000188201 2319 ntBASIC18.77■□□□□ 0.6
Trim55G3X8Y1 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trim55G3X8Y1 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trim55G3X8Y1 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Trim55G3X8Y1 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trim55G3X8Y1 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trim55G3X8Y1 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
Trim55G3X8Y1 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trim55G3X8Y1 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trim55G3X8Y1 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Trim55G3X8Y1 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
Trim55G3X8Y1 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Trim55G3X8Y1 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
Trim55G3X8Y1 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Trim55G3X8Y1 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Trim55G3X8Y1 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC18.76■□□□□ 0.59
Trim55G3X8Y1 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim55G3X8Y1 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim55G3X8Y1 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms