Protein–RNA interactions for Protein: F8VPY8

Colca2, COLCA2 homolog, mousemouse

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Colca2F8VPY8 Gm12085-201ENSMUST00000119263 940 ntBASIC17.5■□□□□ 0.39
Colca2F8VPY8 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Colca2F8VPY8 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Colca2F8VPY8 Mir2861-201ENSMUST00000175539 82 ntBASIC17.5■□□□□ 0.39
Colca2F8VPY8 Gm37805-201ENSMUST00000192612 1094 ntBASIC17.5■□□□□ 0.39
Colca2F8VPY8 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Colca2F8VPY8 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Colca2F8VPY8 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Colca2F8VPY8 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Colca2F8VPY8 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Colca2F8VPY8 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Colca2F8VPY8 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Colca2F8VPY8 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Colca2F8VPY8 Gm14859-201ENSMUST00000117752 357 ntBASIC17.49■□□□□ 0.39
Colca2F8VPY8 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC17.49■□□□□ 0.39
Colca2F8VPY8 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Colca2F8VPY8 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Colca2F8VPY8 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Colca2F8VPY8 Gm38027-201ENSMUST00000192315 235 ntBASIC17.49■□□□□ 0.39
Colca2F8VPY8 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC17.49■□□□□ 0.39
Colca2F8VPY8 AC124603.1-201ENSMUST00000223843 308 ntBASIC17.49■□□□□ 0.39
Colca2F8VPY8 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Colca2F8VPY8 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Colca2F8VPY8 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Colca2F8VPY8 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Colca2F8VPY8 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Colca2F8VPY8 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Colca2F8VPY8 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Colca2F8VPY8 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Colca2F8VPY8 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Colca2F8VPY8 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Colca2F8VPY8 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Colca2F8VPY8 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Colca2F8VPY8 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Colca2F8VPY8 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Colca2F8VPY8 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Colca2F8VPY8 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Colca2F8VPY8 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC17.48■□□□□ 0.39
Colca2F8VPY8 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
Colca2F8VPY8 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Colca2F8VPY8 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Colca2F8VPY8 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC17.48■□□□□ 0.39
Colca2F8VPY8 Gm18101-201ENSMUST00000215769 548 ntBASIC17.48■□□□□ 0.39
Colca2F8VPY8 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Colca2F8VPY8 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC17.48■□□□□ 0.39
Colca2F8VPY8 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Colca2F8VPY8 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Colca2F8VPY8 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Colca2F8VPY8 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Colca2F8VPY8 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Colca2F8VPY8 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Colca2F8VPY8 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC17.47■□□□□ 0.39
Colca2F8VPY8 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Colca2F8VPY8 AC159205.3-201ENSMUST00000224614 874 ntBASIC17.47■□□□□ 0.39
Colca2F8VPY8 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Colca2F8VPY8 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC17.47■□□□□ 0.39
Colca2F8VPY8 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Colca2F8VPY8 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Colca2F8VPY8 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Colca2F8VPY8 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Colca2F8VPY8 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC17.47■□□□□ 0.39
Colca2F8VPY8 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Colca2F8VPY8 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC17.47■□□□□ 0.39
Colca2F8VPY8 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Colca2F8VPY8 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Colca2F8VPY8 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Colca2F8VPY8 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Colca2F8VPY8 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
Colca2F8VPY8 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
Colca2F8VPY8 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Colca2F8VPY8 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC17.46■□□□□ 0.39
Colca2F8VPY8 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Colca2F8VPY8 Gm22697-201ENSMUST00000175194 63 ntBASIC17.46■□□□□ 0.39
Colca2F8VPY8 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Colca2F8VPY8 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Colca2F8VPY8 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Colca2F8VPY8 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Colca2F8VPY8 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
Colca2F8VPY8 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Colca2F8VPY8 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Colca2F8VPY8 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Colca2F8VPY8 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Colca2F8VPY8 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Colca2F8VPY8 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Colca2F8VPY8 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Colca2F8VPY8 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Colca2F8VPY8 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Colca2F8VPY8 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Colca2F8VPY8 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Colca2F8VPY8 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Colca2F8VPY8 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC17.44■□□□□ 0.38
Colca2F8VPY8 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Colca2F8VPY8 Gm14464-201ENSMUST00000119658 1254 ntBASIC17.44■□□□□ 0.38
Colca2F8VPY8 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC17.44■□□□□ 0.38
Colca2F8VPY8 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC17.44■□□□□ 0.38
Colca2F8VPY8 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Colca2F8VPY8 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Colca2F8VPY8 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Colca2F8VPY8 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Colca2F8VPY8 Gm43006-201ENSMUST00000197702 1602 ntBASIC17.43■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms