Protein–RNA interactions for Protein: E9Q2N0

Cpsf4l, Cleavage and polyadenylation-specific factor 4-like, mousemouse

Predictions only

Length 280 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4lE9Q2N0 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Cpsf4lE9Q2N0 Dmtn-210ENSMUST00000228824 2377 ntBASIC15.53■□□□□ 0.08
Cpsf4lE9Q2N0 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Cpsf4lE9Q2N0 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Cpsf4lE9Q2N0 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Cpsf4lE9Q2N0 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Cpsf4lE9Q2N0 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Cpsf4lE9Q2N0 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Cpsf4lE9Q2N0 Gm10602-201ENSMUST00000098239 609 ntBASIC15.52■□□□□ 0.08
Cpsf4lE9Q2N0 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Cpsf4lE9Q2N0 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Cpsf4lE9Q2N0 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
Cpsf4lE9Q2N0 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Cpsf4lE9Q2N0 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC15.52■□□□□ 0.07
Cpsf4lE9Q2N0 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Cpsf4lE9Q2N0 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Cpsf4lE9Q2N0 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Cpsf4lE9Q2N0 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Cpsf4lE9Q2N0 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Cpsf4lE9Q2N0 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cpsf4lE9Q2N0 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cpsf4lE9Q2N0 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cpsf4lE9Q2N0 Gm26524-201ENSMUST00000192339 390 ntBASIC15.51■□□□□ 0.07
Cpsf4lE9Q2N0 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cpsf4lE9Q2N0 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Cpsf4lE9Q2N0 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Cpsf4lE9Q2N0 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cpsf4lE9Q2N0 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cpsf4lE9Q2N0 Gm38308-201ENSMUST00000194934 1809 ntBASIC15.51■□□□□ 0.07
Cpsf4lE9Q2N0 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC15.51■□□□□ 0.07
Cpsf4lE9Q2N0 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cpsf4lE9Q2N0 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cpsf4lE9Q2N0 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cpsf4lE9Q2N0 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC15.5■□□□□ 0.07
Cpsf4lE9Q2N0 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC15.5■□□□□ 0.07
Cpsf4lE9Q2N0 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cpsf4lE9Q2N0 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Cpsf4lE9Q2N0 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cpsf4lE9Q2N0 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cpsf4lE9Q2N0 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cpsf4lE9Q2N0 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Cpsf4lE9Q2N0 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cpsf4lE9Q2N0 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Cpsf4lE9Q2N0 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cpsf4lE9Q2N0 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cpsf4lE9Q2N0 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC15.49■□□□□ 0.07
Cpsf4lE9Q2N0 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cpsf4lE9Q2N0 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cpsf4lE9Q2N0 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cpsf4lE9Q2N0 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cpsf4lE9Q2N0 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cpsf4lE9Q2N0 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Cpsf4lE9Q2N0 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cpsf4lE9Q2N0 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC15.49■□□□□ 0.07
Cpsf4lE9Q2N0 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
Cpsf4lE9Q2N0 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Cpsf4lE9Q2N0 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Cpsf4lE9Q2N0 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cpsf4lE9Q2N0 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cpsf4lE9Q2N0 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cpsf4lE9Q2N0 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC15.49■□□□□ 0.07
Cpsf4lE9Q2N0 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC15.49■□□□□ 0.07
Cpsf4lE9Q2N0 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cpsf4lE9Q2N0 AC121961.1-201ENSMUST00000218594 1779 ntBASIC15.49■□□□□ 0.07
Cpsf4lE9Q2N0 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cpsf4lE9Q2N0 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cpsf4lE9Q2N0 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC15.48■□□□□ 0.07
Cpsf4lE9Q2N0 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cpsf4lE9Q2N0 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cpsf4lE9Q2N0 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cpsf4lE9Q2N0 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Cpsf4lE9Q2N0 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Cpsf4lE9Q2N0 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
Cpsf4lE9Q2N0 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cpsf4lE9Q2N0 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Cpsf4lE9Q2N0 Gm43859-201ENSMUST00000200075 1412 ntBASIC15.48■□□□□ 0.07
Cpsf4lE9Q2N0 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cpsf4lE9Q2N0 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC15.48■□□□□ 0.07
Cpsf4lE9Q2N0 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Cpsf4lE9Q2N0 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cpsf4lE9Q2N0 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cpsf4lE9Q2N0 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cpsf4lE9Q2N0 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cpsf4lE9Q2N0 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cpsf4lE9Q2N0 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC15.47■□□□□ 0.07
Cpsf4lE9Q2N0 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
Cpsf4lE9Q2N0 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC15.47■□□□□ 0.07
Cpsf4lE9Q2N0 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Cpsf4lE9Q2N0 Gm5408-201ENSMUST00000197998 747 ntBASIC15.47■□□□□ 0.07
Cpsf4lE9Q2N0 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Cpsf4lE9Q2N0 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cpsf4lE9Q2N0 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Cpsf4lE9Q2N0 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cpsf4lE9Q2N0 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cpsf4lE9Q2N0 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC15.47■□□□□ 0.07
Cpsf4lE9Q2N0 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Cpsf4lE9Q2N0 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC15.46■□□□□ 0.07
Cpsf4lE9Q2N0 AC140264.2-202ENSMUST00000218746 817 ntBASIC15.46■□□□□ 0.07
Cpsf4lE9Q2N0 Rab3c-203ENSMUST00000224180 967 ntBASIC15.46■□□□□ 0.07
Cpsf4lE9Q2N0 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC15.46■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms