Protein–RNA interactions for Protein: B5KM66

Syce3, Synaptonemal complex central element protein 3, mousemouse

Predictions only

Length 88 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syce3B5KM66 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Syce3B5KM66 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Syce3B5KM66 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Syce3B5KM66 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
Syce3B5KM66 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Syce3B5KM66 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Syce3B5KM66 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Syce3B5KM66 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC20.98■□□□□ 0.95
Syce3B5KM66 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Syce3B5KM66 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Syce3B5KM66 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Syce3B5KM66 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Syce3B5KM66 Gm37194-201ENSMUST00000193092 3031 ntBASIC20.97■□□□□ 0.95
Syce3B5KM66 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Syce3B5KM66 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Syce3B5KM66 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Syce3B5KM66 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
Syce3B5KM66 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Syce3B5KM66 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Syce3B5KM66 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Syce3B5KM66 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Syce3B5KM66 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Syce3B5KM66 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Syce3B5KM66 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC20.96■□□□□ 0.95
Syce3B5KM66 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Syce3B5KM66 Golgb1-201ENSMUST00000023534 498 ntBASIC20.96■□□□□ 0.95
Syce3B5KM66 Gm5812-201ENSMUST00000061073 957 ntBASIC20.96■□□□□ 0.95
Syce3B5KM66 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Syce3B5KM66 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Syce3B5KM66 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Syce3B5KM66 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Syce3B5KM66 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Syce3B5KM66 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC20.96■□□□□ 0.95
Syce3B5KM66 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
Syce3B5KM66 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC20.95■□□□□ 0.95
Syce3B5KM66 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
Syce3B5KM66 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Syce3B5KM66 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Syce3B5KM66 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Syce3B5KM66 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Syce3B5KM66 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Syce3B5KM66 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Syce3B5KM66 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Syce3B5KM66 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Syce3B5KM66 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Syce3B5KM66 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Syce3B5KM66 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Syce3B5KM66 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Syce3B5KM66 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Syce3B5KM66 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Syce3B5KM66 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC20.95■□□□□ 0.94
Syce3B5KM66 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Syce3B5KM66 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Syce3B5KM66 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Syce3B5KM66 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Syce3B5KM66 Gm15546-201ENSMUST00000122095 826 ntBASIC20.94■□□□□ 0.94
Syce3B5KM66 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC20.94■□□□□ 0.94
Syce3B5KM66 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
Syce3B5KM66 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Syce3B5KM66 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
Syce3B5KM66 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Syce3B5KM66 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Syce3B5KM66 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC20.94■□□□□ 0.94
Syce3B5KM66 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Syce3B5KM66 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Syce3B5KM66 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Syce3B5KM66 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Syce3B5KM66 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Syce3B5KM66 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Syce3B5KM66 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Syce3B5KM66 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Syce3B5KM66 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Syce3B5KM66 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Syce3B5KM66 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC20.93■□□□□ 0.94
Syce3B5KM66 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC20.93■□□□□ 0.94
Syce3B5KM66 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC20.93■□□□□ 0.94
Syce3B5KM66 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC20.93■□□□□ 0.94
Syce3B5KM66 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Syce3B5KM66 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Syce3B5KM66 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Syce3B5KM66 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Syce3B5KM66 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Syce3B5KM66 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Syce3B5KM66 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC20.92■□□□□ 0.94
Syce3B5KM66 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Syce3B5KM66 Gm9207-201ENSMUST00000198773 1115 ntBASIC20.92■□□□□ 0.94
Syce3B5KM66 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Syce3B5KM66 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Syce3B5KM66 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC20.92■□□□□ 0.94
Syce3B5KM66 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Syce3B5KM66 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Syce3B5KM66 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Syce3B5KM66 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Syce3B5KM66 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
Syce3B5KM66 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Syce3B5KM66 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
Syce3B5KM66 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC20.91■□□□□ 0.94
Syce3B5KM66 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Syce3B5KM66 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Syce3B5KM66 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 113.9 ms