Protein–RNA interactions for Protein: A6H584

Col6a5, Collagen alpha-5(VI) chain, mousemouse

Predictions only

Length 2,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5A6H584 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col6a5A6H584 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Col6a5A6H584 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col6a5A6H584 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col6a5A6H584 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Col6a5A6H584 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col6a5A6H584 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Col6a5A6H584 Gm18206-201ENSMUST00000207027 926 ntBASIC13.91□□□□□ -0.18
Col6a5A6H584 Gm19094-201ENSMUST00000209791 1246 ntBASIC13.91□□□□□ -0.18
Col6a5A6H584 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC13.91□□□□□ -0.18
Col6a5A6H584 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col6a5A6H584 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Col6a5A6H584 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Col6a5A6H584 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Col6a5A6H584 Gm43347-201ENSMUST00000200226 580 ntBASIC13.9□□□□□ -0.18
Col6a5A6H584 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Col6a5A6H584 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Col6a5A6H584 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Col6a5A6H584 Snhg20-203ENSMUST00000182811 2153 ntBASIC13.9□□□□□ -0.18
Col6a5A6H584 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Col6a5A6H584 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Col6a5A6H584 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Col6a5A6H584 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC13.9□□□□□ -0.18
Col6a5A6H584 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Col6a5A6H584 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Col6a5A6H584 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Col6a5A6H584 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Col6a5A6H584 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC13.9□□□□□ -0.18
Col6a5A6H584 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Col6a5A6H584 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC13.9□□□□□ -0.18
Col6a5A6H584 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Col6a5A6H584 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Col6a5A6H584 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Col6a5A6H584 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC13.9□□□□□ -0.19
Col6a5A6H584 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Col6a5A6H584 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Col6a5A6H584 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Col6a5A6H584 Gm15043-201ENSMUST00000118843 1543 ntBASIC13.89□□□□□ -0.19
Col6a5A6H584 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Col6a5A6H584 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Col6a5A6H584 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC13.89□□□□□ -0.19
Col6a5A6H584 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Col6a5A6H584 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC13.89□□□□□ -0.19
Col6a5A6H584 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Col6a5A6H584 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Col6a5A6H584 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Col6a5A6H584 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Col6a5A6H584 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Col6a5A6H584 Gm10654-201ENSMUST00000098653 1633 ntBASIC13.89□□□□□ -0.19
Col6a5A6H584 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Col6a5A6H584 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC13.89□□□□□ -0.19
Col6a5A6H584 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Col6a5A6H584 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
Col6a5A6H584 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC13.89□□□□□ -0.19
Col6a5A6H584 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Col6a5A6H584 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Col6a5A6H584 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Col6a5A6H584 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Col6a5A6H584 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Col6a5A6H584 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col6a5A6H584 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col6a5A6H584 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col6a5A6H584 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Col6a5A6H584 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col6a5A6H584 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Col6a5A6H584 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC13.88□□□□□ -0.19
Col6a5A6H584 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC13.88□□□□□ -0.19
Col6a5A6H584 Gm28659-201ENSMUST00000188013 759 ntBASIC13.88□□□□□ -0.19
Col6a5A6H584 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col6a5A6H584 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Col6a5A6H584 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Col6a5A6H584 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Col6a5A6H584 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col6a5A6H584 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Col6a5A6H584 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col6a5A6H584 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col6a5A6H584 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC13.88□□□□□ -0.19
Col6a5A6H584 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC13.88□□□□□ -0.19
Col6a5A6H584 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col6a5A6H584 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col6a5A6H584 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Col6a5A6H584 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Col6a5A6H584 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Col6a5A6H584 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col6a5A6H584 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col6a5A6H584 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col6a5A6H584 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col6a5A6H584 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC13.87□□□□□ -0.19
Col6a5A6H584 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Col6a5A6H584 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC13.87□□□□□ -0.19
Col6a5A6H584 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col6a5A6H584 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC13.87□□□□□ -0.19
Col6a5A6H584 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col6a5A6H584 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC13.87□□□□□ -0.19
Col6a5A6H584 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col6a5A6H584 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col6a5A6H584 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col6a5A6H584 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col6a5A6H584 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col6a5A6H584 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 15.8 ms