Protein–RNA interactions for Protein: A3KG49

Gm5640, Predicted gene 5640, mousemouse

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5640A3KG49 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Gm5640A3KG49 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Gm5640A3KG49 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Gm5640A3KG49 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Gm5640A3KG49 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Gm5640A3KG49 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Gm5640A3KG49 Gm10209-201ENSMUST00000203397 1607 ntBASIC18.6■□□□□ 0.57
Gm5640A3KG49 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Gm5640A3KG49 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Gm5640A3KG49 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Gm5640A3KG49 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Gm5640A3KG49 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Gm5640A3KG49 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Gm5640A3KG49 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC18.6■□□□□ 0.57
Gm5640A3KG49 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Gm5640A3KG49 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Gm5640A3KG49 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC18.59■□□□□ 0.57
Gm5640A3KG49 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Gm5640A3KG49 Gm38308-201ENSMUST00000194934 1809 ntBASIC18.59■□□□□ 0.57
Gm5640A3KG49 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Gm5640A3KG49 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Gm5640A3KG49 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC18.59■□□□□ 0.57
Gm5640A3KG49 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC18.59■□□□□ 0.57
Gm5640A3KG49 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Gm5640A3KG49 Ddx41-204ENSMUST00000224765 2199 ntBASIC18.59■□□□□ 0.57
Gm5640A3KG49 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC18.59■□□□□ 0.57
Gm5640A3KG49 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Gm5640A3KG49 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Gm5640A3KG49 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Gm5640A3KG49 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.57
Gm5640A3KG49 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
Gm5640A3KG49 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Gm5640A3KG49 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Gm5640A3KG49 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Gm5640A3KG49 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Gm5640A3KG49 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC18.58■□□□□ 0.56
Gm5640A3KG49 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Gm5640A3KG49 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Gm5640A3KG49 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Gm5640A3KG49 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Gm5640A3KG49 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Gm5640A3KG49 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Gm5640A3KG49 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC18.58■□□□□ 0.56
Gm5640A3KG49 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Gm5640A3KG49 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Gm5640A3KG49 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Gm5640A3KG49 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Gm5640A3KG49 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Gm5640A3KG49 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Gm5640A3KG49 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC18.57■□□□□ 0.56
Gm5640A3KG49 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Gm5640A3KG49 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Gm5640A3KG49 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Gm5640A3KG49 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Gm5640A3KG49 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Gm5640A3KG49 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Gm5640A3KG49 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Gm5640A3KG49 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Gm5640A3KG49 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Gm5640A3KG49 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Gm5640A3KG49 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Gm5640A3KG49 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Gm5640A3KG49 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Gm5640A3KG49 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Gm5640A3KG49 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Gm5640A3KG49 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Gm5640A3KG49 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Gm5640A3KG49 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Gm5640A3KG49 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Gm5640A3KG49 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Gm5640A3KG49 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Gm5640A3KG49 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Gm5640A3KG49 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Gm5640A3KG49 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Gm5640A3KG49 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Gm5640A3KG49 Gm8969-201ENSMUST00000199694 526 ntBASIC18.56■□□□□ 0.56
Gm5640A3KG49 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Gm5640A3KG49 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Gm5640A3KG49 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Gm5640A3KG49 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Gm5640A3KG49 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Gm5640A3KG49 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Gm5640A3KG49 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Gm5640A3KG49 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Gm5640A3KG49 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Gm5640A3KG49 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Gm5640A3KG49 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Gm5640A3KG49 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC18.55■□□□□ 0.56
Gm5640A3KG49 AC093043.1-201ENSMUST00000226700 898 ntBASIC18.55■□□□□ 0.56
Gm5640A3KG49 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Gm5640A3KG49 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC18.55■□□□□ 0.56
Gm5640A3KG49 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
Gm5640A3KG49 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Gm5640A3KG49 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Gm5640A3KG49 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Gm5640A3KG49 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Gm5640A3KG49 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Gm5640A3KG49 Gm9959-201ENSMUST00000068277 390 ntBASIC18.54■□□□□ 0.56
Gm5640A3KG49 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Gm5640A3KG49 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 117.4 ms