Protein–RNA interactions for Protein: A0A504

Smim17, MCG116182, isoform CRA_b, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim17A0A504 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Smim17A0A504 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Smim17A0A504 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Smim17A0A504 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Smim17A0A504 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Smim17A0A504 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Smim17A0A504 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Smim17A0A504 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Smim17A0A504 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC16.64■□□□□ 0.25
Smim17A0A504 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Smim17A0A504 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Smim17A0A504 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Smim17A0A504 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Smim17A0A504 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Smim17A0A504 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Smim17A0A504 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Smim17A0A504 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC16.63■□□□□ 0.25
Smim17A0A504 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC16.63■□□□□ 0.25
Smim17A0A504 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC16.63■□□□□ 0.25
Smim17A0A504 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Smim17A0A504 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Smim17A0A504 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Smim17A0A504 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Smim17A0A504 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Smim17A0A504 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Smim17A0A504 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Smim17A0A504 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Smim17A0A504 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Smim17A0A504 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Smim17A0A504 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Smim17A0A504 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Smim17A0A504 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Smim17A0A504 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Smim17A0A504 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Smim17A0A504 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Smim17A0A504 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Smim17A0A504 Gm45444-201ENSMUST00000211394 898 ntBASIC16.62■□□□□ 0.25
Smim17A0A504 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Smim17A0A504 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Smim17A0A504 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
Smim17A0A504 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Smim17A0A504 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Smim17A0A504 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC16.62■□□□□ 0.25
Smim17A0A504 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Smim17A0A504 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Smim17A0A504 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Smim17A0A504 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Smim17A0A504 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Smim17A0A504 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Smim17A0A504 Gm43672-201ENSMUST00000199072 1731 ntBASIC16.62■□□□□ 0.25
Smim17A0A504 Gm45906-201ENSMUST00000208911 1430 ntBASIC16.62■□□□□ 0.25
Smim17A0A504 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Smim17A0A504 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Smim17A0A504 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Smim17A0A504 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Smim17A0A504 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Smim17A0A504 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Smim17A0A504 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Smim17A0A504 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC16.61■□□□□ 0.25
Smim17A0A504 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC16.61■□□□□ 0.25
Smim17A0A504 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Smim17A0A504 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Smim17A0A504 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Smim17A0A504 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Smim17A0A504 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Smim17A0A504 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Smim17A0A504 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Smim17A0A504 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Smim17A0A504 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Smim17A0A504 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Smim17A0A504 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC16.6■□□□□ 0.25
Smim17A0A504 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Smim17A0A504 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Smim17A0A504 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Smim17A0A504 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC16.6■□□□□ 0.25
Smim17A0A504 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC16.6■□□□□ 0.25
Smim17A0A504 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Smim17A0A504 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Smim17A0A504 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Smim17A0A504 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC16.6■□□□□ 0.25
Smim17A0A504 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Smim17A0A504 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Smim17A0A504 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Smim17A0A504 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC16.59■□□□□ 0.25
Smim17A0A504 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Smim17A0A504 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Smim17A0A504 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Smim17A0A504 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC16.59■□□□□ 0.25
Smim17A0A504 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Smim17A0A504 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Smim17A0A504 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Smim17A0A504 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Smim17A0A504 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Smim17A0A504 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Smim17A0A504 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Smim17A0A504 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Smim17A0A504 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Smim17A0A504 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Smim17A0A504 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Smim17A0A504 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms