Protein–RNA interactions for Protein: A0A1B0GSB3

Gm3880, Predicted pseudogene 3880, mousemouse

Predictions only

Length 72 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3880A0A1B0GSB3 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC9.15□□□□□ -0.94
Gm3880A0A1B0GSB3 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Gm3880A0A1B0GSB3 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC9.15□□□□□ -0.94
Gm3880A0A1B0GSB3 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Gm3880A0A1B0GSB3 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Gm3880A0A1B0GSB3 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Gm3880A0A1B0GSB3 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC9.15□□□□□ -0.94
Gm3880A0A1B0GSB3 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Gm3880A0A1B0GSB3 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC9.15□□□□□ -0.94
Gm3880A0A1B0GSB3 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Gm3880A0A1B0GSB3 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Gm3880A0A1B0GSB3 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Gm3880A0A1B0GSB3 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Gm3880A0A1B0GSB3 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
Gm3880A0A1B0GSB3 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC9.15□□□□□ -0.95
Gm3880A0A1B0GSB3 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC9.15□□□□□ -0.95
Gm3880A0A1B0GSB3 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
Gm3880A0A1B0GSB3 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
Gm3880A0A1B0GSB3 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
Gm3880A0A1B0GSB3 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
Gm3880A0A1B0GSB3 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC9.14□□□□□ -0.95
Gm3880A0A1B0GSB3 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC9.14□□□□□ -0.95
Gm3880A0A1B0GSB3 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Gm3880A0A1B0GSB3 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Gm3880A0A1B0GSB3 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Gm3880A0A1B0GSB3 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Gm3880A0A1B0GSB3 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Gm3880A0A1B0GSB3 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Gm3880A0A1B0GSB3 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Gm3880A0A1B0GSB3 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC9.14□□□□□ -0.95
Gm3880A0A1B0GSB3 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC9.14□□□□□ -0.95
Gm3880A0A1B0GSB3 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Gm3880A0A1B0GSB3 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Gm3880A0A1B0GSB3 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Gm3880A0A1B0GSB3 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC9.14□□□□□ -0.95
Gm3880A0A1B0GSB3 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC9.14□□□□□ -0.95
Gm3880A0A1B0GSB3 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Gm3880A0A1B0GSB3 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Gm3880A0A1B0GSB3 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Gm3880A0A1B0GSB3 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Gm3880A0A1B0GSB3 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC9.14□□□□□ -0.95
Gm3880A0A1B0GSB3 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Gm3880A0A1B0GSB3 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC9.14□□□□□ -0.95
Gm3880A0A1B0GSB3 Gm43294-201ENSMUST00000202850 2490 ntBASIC9.14□□□□□ -0.95
Gm3880A0A1B0GSB3 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Gm3880A0A1B0GSB3 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Gm3880A0A1B0GSB3 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Gm3880A0A1B0GSB3 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Gm3880A0A1B0GSB3 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Gm3880A0A1B0GSB3 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
Gm3880A0A1B0GSB3 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Gm3880A0A1B0GSB3 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Gm3880A0A1B0GSB3 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Gm3880A0A1B0GSB3 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
Gm3880A0A1B0GSB3 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Gm3880A0A1B0GSB3 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Gm3880A0A1B0GSB3 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Gm3880A0A1B0GSB3 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC9.13□□□□□ -0.95
Gm3880A0A1B0GSB3 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Gm3880A0A1B0GSB3 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Gm3880A0A1B0GSB3 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Gm3880A0A1B0GSB3 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC9.13□□□□□ -0.95
Gm3880A0A1B0GSB3 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Gm3880A0A1B0GSB3 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC9.13□□□□□ -0.95
Gm3880A0A1B0GSB3 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Gm3880A0A1B0GSB3 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC9.13□□□□□ -0.95
Gm3880A0A1B0GSB3 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC9.13□□□□□ -0.95
Gm3880A0A1B0GSB3 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC9.13□□□□□ -0.95
Gm3880A0A1B0GSB3 CT010478.1-201ENSMUST00000220747 2787 ntBASIC9.13□□□□□ -0.95
Gm3880A0A1B0GSB3 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
Gm3880A0A1B0GSB3 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Gm3880A0A1B0GSB3 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Gm3880A0A1B0GSB3 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC9.13□□□□□ -0.95
Gm3880A0A1B0GSB3 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC9.13□□□□□ -0.95
Gm3880A0A1B0GSB3 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC9.13□□□□□ -0.95
Gm3880A0A1B0GSB3 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Gm3880A0A1B0GSB3 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Gm3880A0A1B0GSB3 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Gm3880A0A1B0GSB3 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Gm3880A0A1B0GSB3 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
Gm3880A0A1B0GSB3 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Gm3880A0A1B0GSB3 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Gm3880A0A1B0GSB3 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC9.13□□□□□ -0.95
Gm3880A0A1B0GSB3 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Gm3880A0A1B0GSB3 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Gm3880A0A1B0GSB3 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC9.13□□□□□ -0.95
Gm3880A0A1B0GSB3 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Gm3880A0A1B0GSB3 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Gm3880A0A1B0GSB3 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Gm3880A0A1B0GSB3 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC9.12□□□□□ -0.95
Gm3880A0A1B0GSB3 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Gm3880A0A1B0GSB3 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
Gm3880A0A1B0GSB3 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Gm3880A0A1B0GSB3 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC9.12□□□□□ -0.95
Gm3880A0A1B0GSB3 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC9.12□□□□□ -0.95
Gm3880A0A1B0GSB3 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC9.12□□□□□ -0.95
Gm3880A0A1B0GSB3 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Gm3880A0A1B0GSB3 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Gm3880A0A1B0GSB3 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC9.12□□□□□ -0.95
Gm3880A0A1B0GSB3 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC9.12□□□□□ -0.95
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms