Protein–RNA interactions for Protein: A0A0G2LB96

Trbv29, T cell receptor beta, variable 29 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv29A0A0G2LB96 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trbv29A0A0G2LB96 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trbv29A0A0G2LB96 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
Trbv29A0A0G2LB96 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trbv29A0A0G2LB96 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trbv29A0A0G2LB96 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Trbv29A0A0G2LB96 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trbv29A0A0G2LB96 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC15.23■□□□□ 0.03
Trbv29A0A0G2LB96 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
Trbv29A0A0G2LB96 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
Trbv29A0A0G2LB96 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trbv29A0A0G2LB96 Gm38205-201ENSMUST00000192243 258 ntBASIC15.23■□□□□ 0.03
Trbv29A0A0G2LB96 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trbv29A0A0G2LB96 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trbv29A0A0G2LB96 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trbv29A0A0G2LB96 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trbv29A0A0G2LB96 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trbv29A0A0G2LB96 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trbv29A0A0G2LB96 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trbv29A0A0G2LB96 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trbv29A0A0G2LB96 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC15.23■□□□□ 0.03
Trbv29A0A0G2LB96 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trbv29A0A0G2LB96 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Trbv29A0A0G2LB96 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trbv29A0A0G2LB96 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trbv29A0A0G2LB96 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trbv29A0A0G2LB96 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC15.22■□□□□ 0.03
Trbv29A0A0G2LB96 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Trbv29A0A0G2LB96 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC15.22■□□□□ 0.03
Trbv29A0A0G2LB96 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trbv29A0A0G2LB96 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
Trbv29A0A0G2LB96 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Trbv29A0A0G2LB96 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trbv29A0A0G2LB96 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trbv29A0A0G2LB96 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trbv29A0A0G2LB96 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trbv29A0A0G2LB96 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trbv29A0A0G2LB96 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trbv29A0A0G2LB96 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trbv29A0A0G2LB96 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trbv29A0A0G2LB96 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC15.21■□□□□ 0.03
Trbv29A0A0G2LB96 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trbv29A0A0G2LB96 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trbv29A0A0G2LB96 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trbv29A0A0G2LB96 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trbv29A0A0G2LB96 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trbv29A0A0G2LB96 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trbv29A0A0G2LB96 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC15.21■□□□□ 0.03
Trbv29A0A0G2LB96 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trbv29A0A0G2LB96 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC15.21■□□□□ 0.03
Trbv29A0A0G2LB96 Gm37805-201ENSMUST00000192612 1094 ntBASIC15.21■□□□□ 0.03
Trbv29A0A0G2LB96 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Trbv29A0A0G2LB96 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trbv29A0A0G2LB96 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Trbv29A0A0G2LB96 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Trbv29A0A0G2LB96 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trbv29A0A0G2LB96 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Trbv29A0A0G2LB96 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trbv29A0A0G2LB96 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trbv29A0A0G2LB96 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC15.21■□□□□ 0.02
Trbv29A0A0G2LB96 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trbv29A0A0G2LB96 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trbv29A0A0G2LB96 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trbv29A0A0G2LB96 Gm19439-201ENSMUST00000198195 2273 ntBASIC15.2■□□□□ 0.02
Trbv29A0A0G2LB96 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trbv29A0A0G2LB96 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trbv29A0A0G2LB96 Gm38308-201ENSMUST00000194934 1809 ntBASIC15.2■□□□□ 0.02
Trbv29A0A0G2LB96 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trbv29A0A0G2LB96 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC15.2■□□□□ 0.02
Trbv29A0A0G2LB96 Gm14281-201ENSMUST00000121700 1294 ntBASIC15.2■□□□□ 0.02
Trbv29A0A0G2LB96 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC15.2■□□□□ 0.02
Trbv29A0A0G2LB96 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trbv29A0A0G2LB96 Gm26833-201ENSMUST00000180899 440 ntBASIC15.2■□□□□ 0.02
Trbv29A0A0G2LB96 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC15.2■□□□□ 0.02
Trbv29A0A0G2LB96 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trbv29A0A0G2LB96 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC15.2■□□□□ 0.02
Trbv29A0A0G2LB96 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Trbv29A0A0G2LB96 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trbv29A0A0G2LB96 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trbv29A0A0G2LB96 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trbv29A0A0G2LB96 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trbv29A0A0G2LB96 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trbv29A0A0G2LB96 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trbv29A0A0G2LB96 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trbv29A0A0G2LB96 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trbv29A0A0G2LB96 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Trbv29A0A0G2LB96 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trbv29A0A0G2LB96 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trbv29A0A0G2LB96 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trbv29A0A0G2LB96 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trbv29A0A0G2LB96 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC15.19■□□□□ 0.02
Trbv29A0A0G2LB96 Gm12821-201ENSMUST00000120022 600 ntBASIC15.19■□□□□ 0.02
Trbv29A0A0G2LB96 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC15.19■□□□□ 0.02
Trbv29A0A0G2LB96 Gm40848-201ENSMUST00000221998 324 ntBASIC15.19■□□□□ 0.02
Trbv29A0A0G2LB96 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trbv29A0A0G2LB96 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trbv29A0A0G2LB96 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trbv29A0A0G2LB96 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trbv29A0A0G2LB96 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trbv29A0A0G2LB96 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms