Protein–RNA interactions for Protein: A0A0G2JFX3

Trav13d-4, T cell receptor alpha variable 13D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-4A0A0G2JFX3 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Trav13d-4A0A0G2JFX3 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav13d-4A0A0G2JFX3 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav13d-4A0A0G2JFX3 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Trav13d-4A0A0G2JFX3 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Trav13d-4A0A0G2JFX3 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav13d-4A0A0G2JFX3 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav13d-4A0A0G2JFX3 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Trav13d-4A0A0G2JFX3 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav13d-4A0A0G2JFX3 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav13d-4A0A0G2JFX3 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav13d-4A0A0G2JFX3 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav13d-4A0A0G2JFX3 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav13d-4A0A0G2JFX3 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav13d-4A0A0G2JFX3 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav13d-4A0A0G2JFX3 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav13d-4A0A0G2JFX3 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav13d-4A0A0G2JFX3 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav13d-4A0A0G2JFX3 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav13d-4A0A0G2JFX3 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trav13d-4A0A0G2JFX3 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trav13d-4A0A0G2JFX3 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trav13d-4A0A0G2JFX3 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trav13d-4A0A0G2JFX3 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav13d-4A0A0G2JFX3 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav13d-4A0A0G2JFX3 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav13d-4A0A0G2JFX3 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trav13d-4A0A0G2JFX3 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Trav13d-4A0A0G2JFX3 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav13d-4A0A0G2JFX3 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trav13d-4A0A0G2JFX3 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC12.62□□□□□ -0.39
Trav13d-4A0A0G2JFX3 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Trav13d-4A0A0G2JFX3 Gm7860-201ENSMUST00000121190 879 ntBASIC12.62□□□□□ -0.39
Trav13d-4A0A0G2JFX3 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav13d-4A0A0G2JFX3 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC12.62□□□□□ -0.39
Trav13d-4A0A0G2JFX3 AC137127.1-201ENSMUST00000213466 1078 ntBASIC12.62□□□□□ -0.39
Trav13d-4A0A0G2JFX3 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC12.62□□□□□ -0.39
Trav13d-4A0A0G2JFX3 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav13d-4A0A0G2JFX3 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC12.62□□□□□ -0.39
Trav13d-4A0A0G2JFX3 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Trav13d-4A0A0G2JFX3 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav13d-4A0A0G2JFX3 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trav13d-4A0A0G2JFX3 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav13d-4A0A0G2JFX3 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav13d-4A0A0G2JFX3 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav13d-4A0A0G2JFX3 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Trav13d-4A0A0G2JFX3 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC12.62□□□□□ -0.39
Trav13d-4A0A0G2JFX3 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav13d-4A0A0G2JFX3 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav13d-4A0A0G2JFX3 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav13d-4A0A0G2JFX3 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav13d-4A0A0G2JFX3 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC12.61□□□□□ -0.39
Trav13d-4A0A0G2JFX3 Gm43182-201ENSMUST00000199476 2528 ntBASIC12.61□□□□□ -0.39
Trav13d-4A0A0G2JFX3 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav13d-4A0A0G2JFX3 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav13d-4A0A0G2JFX3 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC12.61□□□□□ -0.39
Trav13d-4A0A0G2JFX3 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Trav13d-4A0A0G2JFX3 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav13d-4A0A0G2JFX3 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav13d-4A0A0G2JFX3 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav13d-4A0A0G2JFX3 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Trav13d-4A0A0G2JFX3 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC12.61□□□□□ -0.39
Trav13d-4A0A0G2JFX3 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC12.61□□□□□ -0.39
Trav13d-4A0A0G2JFX3 Gm11421-201ENSMUST00000122124 294 ntBASIC12.61□□□□□ -0.39
Trav13d-4A0A0G2JFX3 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav13d-4A0A0G2JFX3 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav13d-4A0A0G2JFX3 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav13d-4A0A0G2JFX3 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav13d-4A0A0G2JFX3 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav13d-4A0A0G2JFX3 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC12.61□□□□□ -0.39
Trav13d-4A0A0G2JFX3 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav13d-4A0A0G2JFX3 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav13d-4A0A0G2JFX3 AC123834.2-201ENSMUST00000224038 2340 ntBASIC12.61□□□□□ -0.39
Trav13d-4A0A0G2JFX3 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav13d-4A0A0G2JFX3 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav13d-4A0A0G2JFX3 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav13d-4A0A0G2JFX3 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Trav13d-4A0A0G2JFX3 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav13d-4A0A0G2JFX3 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav13d-4A0A0G2JFX3 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav13d-4A0A0G2JFX3 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav13d-4A0A0G2JFX3 Dmtn-207ENSMUST00000228001 2437 ntBASIC12.6□□□□□ -0.39
Trav13d-4A0A0G2JFX3 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav13d-4A0A0G2JFX3 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav13d-4A0A0G2JFX3 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC12.6□□□□□ -0.39
Trav13d-4A0A0G2JFX3 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav13d-4A0A0G2JFX3 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC12.6□□□□□ -0.39
Trav13d-4A0A0G2JFX3 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC12.6□□□□□ -0.39
Trav13d-4A0A0G2JFX3 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trav13d-4A0A0G2JFX3 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trav13d-4A0A0G2JFX3 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav13d-4A0A0G2JFX3 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav13d-4A0A0G2JFX3 Gm45606-201ENSMUST00000209836 2795 ntBASIC12.6□□□□□ -0.39
Trav13d-4A0A0G2JFX3 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav13d-4A0A0G2JFX3 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav13d-4A0A0G2JFX3 Gm42922-201ENSMUST00000195887 2078 ntBASIC12.6□□□□□ -0.39
Trav13d-4A0A0G2JFX3 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav13d-4A0A0G2JFX3 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav13d-4A0A0G2JFX3 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trav13d-4A0A0G2JFX3 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms