Protein–RNA interactions for Protein: A0A0G2JF93

Trav13n-2, T cell receptor alpha variable 13D-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-2A0A0G2JF93 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav13n-2A0A0G2JF93 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav13n-2A0A0G2JF93 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC12.16□□□□□ -0.46
Trav13n-2A0A0G2JF93 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC12.16□□□□□ -0.46
Trav13n-2A0A0G2JF93 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Trav13n-2A0A0G2JF93 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Trav13n-2A0A0G2JF93 AC154266.1-201ENSMUST00000223190 503 ntBASIC12.16□□□□□ -0.46
Trav13n-2A0A0G2JF93 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Trav13n-2A0A0G2JF93 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav13n-2A0A0G2JF93 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav13n-2A0A0G2JF93 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Trav13n-2A0A0G2JF93 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav13n-2A0A0G2JF93 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav13n-2A0A0G2JF93 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Trav13n-2A0A0G2JF93 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Trav13n-2A0A0G2JF93 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav13n-2A0A0G2JF93 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trav13n-2A0A0G2JF93 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav13n-2A0A0G2JF93 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trav13n-2A0A0G2JF93 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Trav13n-2A0A0G2JF93 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Trav13n-2A0A0G2JF93 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trav13n-2A0A0G2JF93 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Trav13n-2A0A0G2JF93 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav13n-2A0A0G2JF93 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav13n-2A0A0G2JF93 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Trav13n-2A0A0G2JF93 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Trav13n-2A0A0G2JF93 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trav13n-2A0A0G2JF93 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav13n-2A0A0G2JF93 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav13n-2A0A0G2JF93 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Trav13n-2A0A0G2JF93 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav13n-2A0A0G2JF93 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav13n-2A0A0G2JF93 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav13n-2A0A0G2JF93 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC12.15□□□□□ -0.46
Trav13n-2A0A0G2JF93 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC12.15□□□□□ -0.46
Trav13n-2A0A0G2JF93 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC12.15□□□□□ -0.46
Trav13n-2A0A0G2JF93 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav13n-2A0A0G2JF93 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav13n-2A0A0G2JF93 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav13n-2A0A0G2JF93 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
Trav13n-2A0A0G2JF93 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav13n-2A0A0G2JF93 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav13n-2A0A0G2JF93 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav13n-2A0A0G2JF93 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav13n-2A0A0G2JF93 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav13n-2A0A0G2JF93 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav13n-2A0A0G2JF93 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav13n-2A0A0G2JF93 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav13n-2A0A0G2JF93 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Trav13n-2A0A0G2JF93 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.47
Trav13n-2A0A0G2JF93 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Trav13n-2A0A0G2JF93 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.47
Trav13n-2A0A0G2JF93 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Trav13n-2A0A0G2JF93 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Trav13n-2A0A0G2JF93 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trav13n-2A0A0G2JF93 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav13n-2A0A0G2JF93 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trav13n-2A0A0G2JF93 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC12.14□□□□□ -0.47
Trav13n-2A0A0G2JF93 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav13n-2A0A0G2JF93 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav13n-2A0A0G2JF93 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav13n-2A0A0G2JF93 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
Trav13n-2A0A0G2JF93 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trav13n-2A0A0G2JF93 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav13n-2A0A0G2JF93 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Trav13n-2A0A0G2JF93 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav13n-2A0A0G2JF93 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav13n-2A0A0G2JF93 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC12.13□□□□□ -0.47
Trav13n-2A0A0G2JF93 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trav13n-2A0A0G2JF93 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trav13n-2A0A0G2JF93 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav13n-2A0A0G2JF93 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav13n-2A0A0G2JF93 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav13n-2A0A0G2JF93 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav13n-2A0A0G2JF93 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
Trav13n-2A0A0G2JF93 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC12.13□□□□□ -0.47
Trav13n-2A0A0G2JF93 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav13n-2A0A0G2JF93 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Trav13n-2A0A0G2JF93 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC12.13□□□□□ -0.47
Trav13n-2A0A0G2JF93 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav13n-2A0A0G2JF93 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trav13n-2A0A0G2JF93 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trav13n-2A0A0G2JF93 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav13n-2A0A0G2JF93 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav13n-2A0A0G2JF93 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav13n-2A0A0G2JF93 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav13n-2A0A0G2JF93 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trav13n-2A0A0G2JF93 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Trav13n-2A0A0G2JF93 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav13n-2A0A0G2JF93 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav13n-2A0A0G2JF93 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trav13n-2A0A0G2JF93 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav13n-2A0A0G2JF93 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav13n-2A0A0G2JF93 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav13n-2A0A0G2JF93 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav13n-2A0A0G2JF93 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav13n-2A0A0G2JF93 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav13n-2A0A0G2JF93 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav13n-2A0A0G2JF93 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms