Protein–RNA interactions for Protein: A0A0B4J1K4

Trav19, T cell receptor alpha variable 19 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav19A0A0B4J1K4 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav19A0A0B4J1K4 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav19A0A0B4J1K4 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Trav19A0A0B4J1K4 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC13.71□□□□□ -0.21
Trav19A0A0B4J1K4 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav19A0A0B4J1K4 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav19A0A0B4J1K4 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Trav19A0A0B4J1K4 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Trav19A0A0B4J1K4 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav19A0A0B4J1K4 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav19A0A0B4J1K4 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav19A0A0B4J1K4 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
Trav19A0A0B4J1K4 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav19A0A0B4J1K4 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav19A0A0B4J1K4 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav19A0A0B4J1K4 Gm37811-201ENSMUST00000192416 2601 ntBASIC13.71□□□□□ -0.22
Trav19A0A0B4J1K4 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trav19A0A0B4J1K4 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trav19A0A0B4J1K4 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Trav19A0A0B4J1K4 AC165080.2-201ENSMUST00000217491 1530 ntBASIC13.7□□□□□ -0.22
Trav19A0A0B4J1K4 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav19A0A0B4J1K4 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav19A0A0B4J1K4 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav19A0A0B4J1K4 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav19A0A0B4J1K4 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav19A0A0B4J1K4 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Trav19A0A0B4J1K4 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Trav19A0A0B4J1K4 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav19A0A0B4J1K4 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Trav19A0A0B4J1K4 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC13.7□□□□□ -0.22
Trav19A0A0B4J1K4 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC13.7□□□□□ -0.22
Trav19A0A0B4J1K4 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav19A0A0B4J1K4 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav19A0A0B4J1K4 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trav19A0A0B4J1K4 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trav19A0A0B4J1K4 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Trav19A0A0B4J1K4 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Trav19A0A0B4J1K4 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trav19A0A0B4J1K4 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav19A0A0B4J1K4 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav19A0A0B4J1K4 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trav19A0A0B4J1K4 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav19A0A0B4J1K4 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav19A0A0B4J1K4 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Trav19A0A0B4J1K4 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav19A0A0B4J1K4 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav19A0A0B4J1K4 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav19A0A0B4J1K4 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trav19A0A0B4J1K4 Gm11421-201ENSMUST00000122124 294 ntBASIC13.69□□□□□ -0.22
Trav19A0A0B4J1K4 Gm43137-201ENSMUST00000198052 594 ntBASIC13.69□□□□□ -0.22
Trav19A0A0B4J1K4 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav19A0A0B4J1K4 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC13.69□□□□□ -0.22
Trav19A0A0B4J1K4 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav19A0A0B4J1K4 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav19A0A0B4J1K4 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Trav19A0A0B4J1K4 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav19A0A0B4J1K4 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trav19A0A0B4J1K4 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav19A0A0B4J1K4 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Trav19A0A0B4J1K4 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav19A0A0B4J1K4 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trav19A0A0B4J1K4 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav19A0A0B4J1K4 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav19A0A0B4J1K4 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC13.68□□□□□ -0.22
Trav19A0A0B4J1K4 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Trav19A0A0B4J1K4 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav19A0A0B4J1K4 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav19A0A0B4J1K4 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav19A0A0B4J1K4 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav19A0A0B4J1K4 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav19A0A0B4J1K4 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Trav19A0A0B4J1K4 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav19A0A0B4J1K4 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trav19A0A0B4J1K4 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trav19A0A0B4J1K4 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC13.68□□□□□ -0.22
Trav19A0A0B4J1K4 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav19A0A0B4J1K4 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav19A0A0B4J1K4 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav19A0A0B4J1K4 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav19A0A0B4J1K4 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav19A0A0B4J1K4 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav19A0A0B4J1K4 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav19A0A0B4J1K4 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav19A0A0B4J1K4 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Trav19A0A0B4J1K4 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC13.68□□□□□ -0.22
Trav19A0A0B4J1K4 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav19A0A0B4J1K4 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav19A0A0B4J1K4 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav19A0A0B4J1K4 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trav19A0A0B4J1K4 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav19A0A0B4J1K4 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav19A0A0B4J1K4 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav19A0A0B4J1K4 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav19A0A0B4J1K4 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Trav19A0A0B4J1K4 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC13.67□□□□□ -0.22
Trav19A0A0B4J1K4 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Trav19A0A0B4J1K4 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Trav19A0A0B4J1K4 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trav19A0A0B4J1K4 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav19A0A0B4J1K4 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 14.6 ms