Protein–RNA interactions for Protein: A0A0B4J1J5

Ighv9-3, Immunoglobulin heavy variable V9-3 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv9-3A0A0B4J1J5 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
Ighv9-3A0A0B4J1J5 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC15.24■□□□□ 0.03
Ighv9-3A0A0B4J1J5 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC15.24■□□□□ 0.03
Ighv9-3A0A0B4J1J5 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Ighv9-3A0A0B4J1J5 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ighv9-3A0A0B4J1J5 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ighv9-3A0A0B4J1J5 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Ighv9-3A0A0B4J1J5 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Ighv9-3A0A0B4J1J5 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ighv9-3A0A0B4J1J5 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ighv9-3A0A0B4J1J5 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC15.23■□□□□ 0.03
Ighv9-3A0A0B4J1J5 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ighv9-3A0A0B4J1J5 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ighv9-3A0A0B4J1J5 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ighv9-3A0A0B4J1J5 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC15.23■□□□□ 0.03
Ighv9-3A0A0B4J1J5 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Ighv9-3A0A0B4J1J5 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ighv9-3A0A0B4J1J5 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC15.23■□□□□ 0.03
Ighv9-3A0A0B4J1J5 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ighv9-3A0A0B4J1J5 Gm26524-201ENSMUST00000192339 390 ntBASIC15.23■□□□□ 0.03
Ighv9-3A0A0B4J1J5 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Ighv9-3A0A0B4J1J5 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ighv9-3A0A0B4J1J5 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC15.23■□□□□ 0.03
Ighv9-3A0A0B4J1J5 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ighv9-3A0A0B4J1J5 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Ighv9-3A0A0B4J1J5 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ighv9-3A0A0B4J1J5 AC122335.2-201ENSMUST00000213901 6181 ntBASIC15.23■□□□□ 0.03
Ighv9-3A0A0B4J1J5 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ighv9-3A0A0B4J1J5 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ighv9-3A0A0B4J1J5 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Ighv9-3A0A0B4J1J5 Gm7856-201ENSMUST00000117514 1493 ntBASIC15.22■□□□□ 0.03
Ighv9-3A0A0B4J1J5 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ighv9-3A0A0B4J1J5 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC15.22■□□□□ 0.03
Ighv9-3A0A0B4J1J5 Gm44672-201ENSMUST00000206944 1098 ntBASIC15.22■□□□□ 0.03
Ighv9-3A0A0B4J1J5 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ighv9-3A0A0B4J1J5 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC15.22■□□□□ 0.03
Ighv9-3A0A0B4J1J5 Rab3c-203ENSMUST00000224180 967 ntBASIC15.22■□□□□ 0.03
Ighv9-3A0A0B4J1J5 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Ighv9-3A0A0B4J1J5 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Ighv9-3A0A0B4J1J5 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ighv9-3A0A0B4J1J5 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ighv9-3A0A0B4J1J5 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ighv9-3A0A0B4J1J5 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ighv9-3A0A0B4J1J5 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ighv9-3A0A0B4J1J5 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ighv9-3A0A0B4J1J5 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ighv9-3A0A0B4J1J5 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ighv9-3A0A0B4J1J5 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Ighv9-3A0A0B4J1J5 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Ighv9-3A0A0B4J1J5 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Ighv9-3A0A0B4J1J5 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ighv9-3A0A0B4J1J5 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC15.21■□□□□ 0.03
Ighv9-3A0A0B4J1J5 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC15.21■□□□□ 0.03
Ighv9-3A0A0B4J1J5 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC15.21■□□□□ 0.03
Ighv9-3A0A0B4J1J5 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Ighv9-3A0A0B4J1J5 AC122769.4-201ENSMUST00000228166 901 ntBASIC15.21■□□□□ 0.03
Ighv9-3A0A0B4J1J5 Spcs1-207ENSMUST00000228767 1008 ntBASIC15.21■□□□□ 0.03
Ighv9-3A0A0B4J1J5 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ighv9-3A0A0B4J1J5 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ighv9-3A0A0B4J1J5 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Ighv9-3A0A0B4J1J5 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Ighv9-3A0A0B4J1J5 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Ighv9-3A0A0B4J1J5 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Ighv9-3A0A0B4J1J5 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Ighv9-3A0A0B4J1J5 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ighv9-3A0A0B4J1J5 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ighv9-3A0A0B4J1J5 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Ighv9-3A0A0B4J1J5 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC15.2■□□□□ 0.02
Ighv9-3A0A0B4J1J5 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Ighv9-3A0A0B4J1J5 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ighv9-3A0A0B4J1J5 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC15.2■□□□□ 0.02
Ighv9-3A0A0B4J1J5 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC15.2■□□□□ 0.02
Ighv9-3A0A0B4J1J5 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC15.2■□□□□ 0.02
Ighv9-3A0A0B4J1J5 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Ighv9-3A0A0B4J1J5 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Ighv9-3A0A0B4J1J5 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ighv9-3A0A0B4J1J5 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Ighv9-3A0A0B4J1J5 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ighv9-3A0A0B4J1J5 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC15.2■□□□□ 0.02
Ighv9-3A0A0B4J1J5 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ighv9-3A0A0B4J1J5 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ighv9-3A0A0B4J1J5 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC15.19■□□□□ 0.02
Ighv9-3A0A0B4J1J5 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ighv9-3A0A0B4J1J5 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ighv9-3A0A0B4J1J5 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Ighv9-3A0A0B4J1J5 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
Ighv9-3A0A0B4J1J5 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC15.19■□□□□ 0.02
Ighv9-3A0A0B4J1J5 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC15.19■□□□□ 0.02
Ighv9-3A0A0B4J1J5 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ighv9-3A0A0B4J1J5 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC15.19■□□□□ 0.02
Ighv9-3A0A0B4J1J5 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ighv9-3A0A0B4J1J5 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Ighv9-3A0A0B4J1J5 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Ighv9-3A0A0B4J1J5 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ighv9-3A0A0B4J1J5 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ighv9-3A0A0B4J1J5 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ighv9-3A0A0B4J1J5 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ighv9-3A0A0B4J1J5 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ighv9-3A0A0B4J1J5 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ighv9-3A0A0B4J1J5 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms