Protein–RNA interactions for Protein: A0A087WPN2

Gm3604, Predicted gene 3604, mousemouse

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3604A0A087WPN2 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Gm3604A0A087WPN2 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Gm3604A0A087WPN2 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Gm3604A0A087WPN2 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Gm3604A0A087WPN2 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Gm3604A0A087WPN2 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Gm3604A0A087WPN2 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Gm3604A0A087WPN2 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Gm3604A0A087WPN2 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Gm3604A0A087WPN2 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC18.43■□□□□ 0.54
Gm3604A0A087WPN2 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
Gm3604A0A087WPN2 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Gm3604A0A087WPN2 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Gm3604A0A087WPN2 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Gm3604A0A087WPN2 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC18.43■□□□□ 0.54
Gm3604A0A087WPN2 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC18.42■□□□□ 0.54
Gm3604A0A087WPN2 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Gm3604A0A087WPN2 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC18.42■□□□□ 0.54
Gm3604A0A087WPN2 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Gm3604A0A087WPN2 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Gm3604A0A087WPN2 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Gm3604A0A087WPN2 Gm7856-201ENSMUST00000117514 1493 ntBASIC18.42■□□□□ 0.54
Gm3604A0A087WPN2 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Gm3604A0A087WPN2 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Gm3604A0A087WPN2 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Gm3604A0A087WPN2 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Gm3604A0A087WPN2 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Gm3604A0A087WPN2 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Gm3604A0A087WPN2 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Gm3604A0A087WPN2 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Gm3604A0A087WPN2 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Gm3604A0A087WPN2 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC18.41■□□□□ 0.54
Gm3604A0A087WPN2 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC18.41■□□□□ 0.54
Gm3604A0A087WPN2 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Gm3604A0A087WPN2 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Gm3604A0A087WPN2 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Gm3604A0A087WPN2 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Gm3604A0A087WPN2 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
Gm3604A0A087WPN2 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Gm3604A0A087WPN2 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Gm3604A0A087WPN2 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Gm3604A0A087WPN2 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Gm3604A0A087WPN2 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Gm3604A0A087WPN2 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Gm3604A0A087WPN2 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Gm3604A0A087WPN2 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Gm3604A0A087WPN2 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Gm3604A0A087WPN2 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Gm3604A0A087WPN2 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Gm3604A0A087WPN2 Gm42922-201ENSMUST00000195887 2078 ntBASIC18.4■□□□□ 0.54
Gm3604A0A087WPN2 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Gm3604A0A087WPN2 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC18.39■□□□□ 0.53
Gm3604A0A087WPN2 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
Gm3604A0A087WPN2 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC18.39■□□□□ 0.53
Gm3604A0A087WPN2 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC18.39■□□□□ 0.53
Gm3604A0A087WPN2 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Gm3604A0A087WPN2 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Gm3604A0A087WPN2 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Gm3604A0A087WPN2 Gm43672-201ENSMUST00000199072 1731 ntBASIC18.39■□□□□ 0.53
Gm3604A0A087WPN2 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Gm3604A0A087WPN2 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Gm3604A0A087WPN2 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC18.39■□□□□ 0.53
Gm3604A0A087WPN2 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Gm3604A0A087WPN2 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Gm3604A0A087WPN2 Gm8309-201ENSMUST00000206627 1448 ntBASIC18.39■□□□□ 0.53
Gm3604A0A087WPN2 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Gm3604A0A087WPN2 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC18.39■□□□□ 0.53
Gm3604A0A087WPN2 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Gm3604A0A087WPN2 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Gm3604A0A087WPN2 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC18.38■□□□□ 0.53
Gm3604A0A087WPN2 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Gm3604A0A087WPN2 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC18.38■□□□□ 0.53
Gm3604A0A087WPN2 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Gm3604A0A087WPN2 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC18.38■□□□□ 0.53
Gm3604A0A087WPN2 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Gm3604A0A087WPN2 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Gm3604A0A087WPN2 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Gm3604A0A087WPN2 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Gm3604A0A087WPN2 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Gm3604A0A087WPN2 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Gm3604A0A087WPN2 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC18.38■□□□□ 0.53
Gm3604A0A087WPN2 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Gm3604A0A087WPN2 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Gm3604A0A087WPN2 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
Gm3604A0A087WPN2 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Gm3604A0A087WPN2 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Gm3604A0A087WPN2 Gm37856-201ENSMUST00000191634 999 ntBASIC18.37■□□□□ 0.53
Gm3604A0A087WPN2 Gm37805-201ENSMUST00000192612 1094 ntBASIC18.37■□□□□ 0.53
Gm3604A0A087WPN2 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC18.37■□□□□ 0.53
Gm3604A0A087WPN2 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Gm3604A0A087WPN2 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Gm3604A0A087WPN2 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Gm3604A0A087WPN2 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Gm3604A0A087WPN2 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Gm3604A0A087WPN2 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Gm3604A0A087WPN2 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Gm3604A0A087WPN2 AC160393.1-201ENSMUST00000218378 1279 ntBASIC18.36■□□□□ 0.53
Gm3604A0A087WPN2 AC135637.1-201ENSMUST00000227750 365 ntBASIC18.36■□□□□ 0.53
Gm3604A0A087WPN2 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Gm3604A0A087WPN2 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms