Protein–RNA interactions for Protein: A0A075B6A6

Trav6n-7, T cell receptor alpha variable 6N-7 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-7A0A075B6A6 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav6n-7A0A075B6A6 Gm13509-201ENSMUST00000119733 1308 ntBASIC15.6■□□□□ 0.09
Trav6n-7A0A075B6A6 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav6n-7A0A075B6A6 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC15.6■□□□□ 0.09
Trav6n-7A0A075B6A6 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav6n-7A0A075B6A6 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav6n-7A0A075B6A6 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav6n-7A0A075B6A6 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav6n-7A0A075B6A6 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Trav6n-7A0A075B6A6 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav6n-7A0A075B6A6 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Trav6n-7A0A075B6A6 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
Trav6n-7A0A075B6A6 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav6n-7A0A075B6A6 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Trav6n-7A0A075B6A6 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav6n-7A0A075B6A6 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Trav6n-7A0A075B6A6 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav6n-7A0A075B6A6 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav6n-7A0A075B6A6 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav6n-7A0A075B6A6 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav6n-7A0A075B6A6 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav6n-7A0A075B6A6 Gm13148-201ENSMUST00000118892 745 ntBASIC15.58■□□□□ 0.08
Trav6n-7A0A075B6A6 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav6n-7A0A075B6A6 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav6n-7A0A075B6A6 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Trav6n-7A0A075B6A6 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav6n-7A0A075B6A6 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav6n-7A0A075B6A6 Gm37563-201ENSMUST00000192580 1513 ntBASIC15.58■□□□□ 0.08
Trav6n-7A0A075B6A6 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Trav6n-7A0A075B6A6 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Trav6n-7A0A075B6A6 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav6n-7A0A075B6A6 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Trav6n-7A0A075B6A6 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav6n-7A0A075B6A6 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Trav6n-7A0A075B6A6 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav6n-7A0A075B6A6 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav6n-7A0A075B6A6 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
Trav6n-7A0A075B6A6 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC15.57■□□□□ 0.08
Trav6n-7A0A075B6A6 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Trav6n-7A0A075B6A6 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav6n-7A0A075B6A6 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav6n-7A0A075B6A6 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav6n-7A0A075B6A6 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav6n-7A0A075B6A6 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav6n-7A0A075B6A6 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Trav6n-7A0A075B6A6 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC15.57■□□□□ 0.08
Trav6n-7A0A075B6A6 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Trav6n-7A0A075B6A6 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav6n-7A0A075B6A6 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav6n-7A0A075B6A6 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav6n-7A0A075B6A6 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav6n-7A0A075B6A6 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav6n-7A0A075B6A6 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav6n-7A0A075B6A6 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav6n-7A0A075B6A6 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trav6n-7A0A075B6A6 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Trav6n-7A0A075B6A6 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC15.56■□□□□ 0.08
Trav6n-7A0A075B6A6 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav6n-7A0A075B6A6 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav6n-7A0A075B6A6 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Trav6n-7A0A075B6A6 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav6n-7A0A075B6A6 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav6n-7A0A075B6A6 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav6n-7A0A075B6A6 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav6n-7A0A075B6A6 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Trav6n-7A0A075B6A6 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav6n-7A0A075B6A6 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Trav6n-7A0A075B6A6 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav6n-7A0A075B6A6 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav6n-7A0A075B6A6 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav6n-7A0A075B6A6 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trav6n-7A0A075B6A6 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Trav6n-7A0A075B6A6 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav6n-7A0A075B6A6 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Trav6n-7A0A075B6A6 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav6n-7A0A075B6A6 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
Trav6n-7A0A075B6A6 Gm37805-201ENSMUST00000192612 1094 ntBASIC15.55■□□□□ 0.08
Trav6n-7A0A075B6A6 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC15.55■□□□□ 0.08
Trav6n-7A0A075B6A6 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Trav6n-7A0A075B6A6 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav6n-7A0A075B6A6 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Trav6n-7A0A075B6A6 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav6n-7A0A075B6A6 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav6n-7A0A075B6A6 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav6n-7A0A075B6A6 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav6n-7A0A075B6A6 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav6n-7A0A075B6A6 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC15.55■□□□□ 0.08
Trav6n-7A0A075B6A6 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trav6n-7A0A075B6A6 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC15.54■□□□□ 0.08
Trav6n-7A0A075B6A6 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav6n-7A0A075B6A6 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC15.54■□□□□ 0.08
Trav6n-7A0A075B6A6 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav6n-7A0A075B6A6 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trav6n-7A0A075B6A6 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav6n-7A0A075B6A6 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav6n-7A0A075B6A6 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav6n-7A0A075B6A6 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav6n-7A0A075B6A6 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav6n-7A0A075B6A6 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav6n-7A0A075B6A6 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms